Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIRPB1O00241 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIRPB1O00241 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.25■□□□□ 0.51
SIRPB1O00241 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.25■□□□□ 0.51
SIRPB1O00241 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SIRPB1O00241 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.25■□□□□ 0.51
SIRPB1O00241 AL031602.1-201ENST00000633169 911 ntBASIC18.25■□□□□ 0.51
SIRPB1O00241 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIRPB1O00241 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.25■□□□□ 0.51
SIRPB1O00241 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SIRPB1O00241 CLDN5-201ENST00000403084 2357 ntBASIC18.25■□□□□ 0.51
SIRPB1O00241 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIRPB1O00241 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIRPB1O00241 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.24■□□□□ 0.51
SIRPB1O00241 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.24■□□□□ 0.51
SIRPB1O00241 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.24■□□□□ 0.51
SIRPB1O00241 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.24■□□□□ 0.51
SIRPB1O00241 DUX4L19-201ENST00000557448 1267 ntBASIC18.24■□□□□ 0.51
SIRPB1O00241 AC010525.1-201ENST00000585559 441 ntBASIC18.24■□□□□ 0.51
SIRPB1O00241 FBXW4P1-201ENST00000426721 2239 ntBASIC18.24■□□□□ 0.51
SIRPB1O00241 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.24■□□□□ 0.51
SIRPB1O00241 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIRPB1O00241 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIRPB1O00241 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.23■□□□□ 0.51
SIRPB1O00241 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.23■□□□□ 0.51
SIRPB1O00241 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIRPB1O00241 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SIRPB1O00241 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIRPB1O00241 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SIRPB1O00241 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIRPB1O00241 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.23■□□□□ 0.51
SIRPB1O00241 OR2I1P-207ENST00000453522 948 ntBASIC18.23■□□□□ 0.51
SIRPB1O00241 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
SIRPB1O00241 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIRPB1O00241 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SIRPB1O00241 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
SIRPB1O00241 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.22■□□□□ 0.51
SIRPB1O00241 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.22■□□□□ 0.51
SIRPB1O00241 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SIRPB1O00241 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.22■□□□□ 0.51
SIRPB1O00241 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.22■□□□□ 0.51
SIRPB1O00241 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SIRPB1O00241 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.22■□□□□ 0.51
SIRPB1O00241 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIRPB1O00241 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SIRPB1O00241 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SIRPB1O00241 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SIRPB1O00241 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SIRPB1O00241 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.21■□□□□ 0.51
SIRPB1O00241 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SIRPB1O00241 AL138724.1-201ENST00000606771 1088 ntBASIC18.21■□□□□ 0.51
SIRPB1O00241 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SIRPB1O00241 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SIRPB1O00241 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SIRPB1O00241 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SIRPB1O00241 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIRPB1O00241 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.21■□□□□ 0.51
SIRPB1O00241 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 AC087239.1-201ENST00000622671 572 ntBASIC18.2■□□□□ 0.5
SIRPB1O00241 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.2■□□□□ 0.5
SIRPB1O00241 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIRPB1O00241 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIRPB1O00241 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms