Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
AP3B1O00203 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
AP3B1O00203 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.84■■□□□ 1.09
AP3B1O00203 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
AP3B1O00203 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.84■■□□□ 1.09
AP3B1O00203 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.84■■□□□ 1.09
AP3B1O00203 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 AC131281.2-201ENST00000520478 145 ntBASIC21.84■■□□□ 1.09
AP3B1O00203 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.84■■□□□ 1.09
AP3B1O00203 FAM99A-202ENST00000538190 1989 ntBASIC21.84■■□□□ 1.09
AP3B1O00203 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
AP3B1O00203 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
AP3B1O00203 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.83■■□□□ 1.09
AP3B1O00203 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.83■■□□□ 1.09
AP3B1O00203 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.83■■□□□ 1.09
AP3B1O00203 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
AP3B1O00203 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
AP3B1O00203 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
AP3B1O00203 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
AP3B1O00203 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.82■■□□□ 1.08
AP3B1O00203 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP3B1O00203 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 AC010542.4-201ENST00000563151 1910 ntBASIC21.81■■□□□ 1.08
AP3B1O00203 AL034346.1-201ENST00000568244 1277 ntBASIC21.81■■□□□ 1.08
AP3B1O00203 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.81■■□□□ 1.08
AP3B1O00203 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
AP3B1O00203 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
AP3B1O00203 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
AP3B1O00203 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.81■■□□□ 1.08
AP3B1O00203 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP3B1O00203 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
AP3B1O00203 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.8■■□□□ 1.08
AP3B1O00203 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.8■■□□□ 1.08
AP3B1O00203 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.8■■□□□ 1.08
AP3B1O00203 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.8■■□□□ 1.08
AP3B1O00203 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
AP3B1O00203 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.8■■□□□ 1.08
AP3B1O00203 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP3B1O00203 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.79■■□□□ 1.08
AP3B1O00203 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
AP3B1O00203 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 AC010525.1-201ENST00000585559 441 ntBASIC21.79■■□□□ 1.08
AP3B1O00203 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
AP3B1O00203 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
AP3B1O00203 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
AP3B1O00203 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 AC244015.2-201ENST00000616358 1861 ntBASIC21.79■■□□□ 1.08
AP3B1O00203 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
AP3B1O00203 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP3B1O00203 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
AP3B1O00203 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
AP3B1O00203 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
AP3B1O00203 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
AP3B1O00203 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.78■■□□□ 1.08
AP3B1O00203 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.78■■□□□ 1.08
AP3B1O00203 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
AP3B1O00203 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.78■■□□□ 1.08
AP3B1O00203 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP3B1O00203 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.78■■□□□ 1.08
AP3B1O00203 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms