Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX39AO00148 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX39AO00148 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX39AO00148 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX39AO00148 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX39AO00148 AC137767.1-201ENST00000602918 1920 ntBASIC24.35■■□□□ 1.49
DDX39AO00148 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX39AO00148 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX39AO00148 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX39AO00148 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX39AO00148 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX39AO00148 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX39AO00148 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.35■■□□□ 1.49
DDX39AO00148 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX39AO00148 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
DDX39AO00148 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX39AO00148 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX39AO00148 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
DDX39AO00148 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
DDX39AO00148 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
DDX39AO00148 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.34■■□□□ 1.49
DDX39AO00148 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
DDX39AO00148 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.34■■□□□ 1.49
DDX39AO00148 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
DDX39AO00148 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.34■■□□□ 1.49
DDX39AO00148 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
DDX39AO00148 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
DDX39AO00148 OR7E47P-201ENST00000546390 1422 ntBASIC24.34■■□□□ 1.49
DDX39AO00148 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX39AO00148 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX39AO00148 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.33■■□□□ 1.49
DDX39AO00148 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
DDX39AO00148 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX39AO00148 NTF6G-201ENST00000591094 616 ntBASIC24.33■■□□□ 1.49
DDX39AO00148 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.33■■□□□ 1.49
DDX39AO00148 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
DDX39AO00148 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.33■■□□□ 1.49
DDX39AO00148 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.33■■□□□ 1.49
DDX39AO00148 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DDX39AO00148 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX39AO00148 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.32■■□□□ 1.48
DDX39AO00148 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.32■■□□□ 1.48
DDX39AO00148 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
DDX39AO00148 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
DDX39AO00148 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
DDX39AO00148 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX39AO00148 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX39AO00148 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX39AO00148 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.31■■□□□ 1.48
DDX39AO00148 IKBKGP1-201ENST00000612193 1073 ntBASIC24.31■■□□□ 1.48
DDX39AO00148 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.31■■□□□ 1.48
DDX39AO00148 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
DDX39AO00148 AP004607.7-201ENST00000527152 1677 ntBASIC24.3■■□□□ 1.48
DDX39AO00148 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
DDX39AO00148 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
DDX39AO00148 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX39AO00148 KRT18P61-201ENST00000585825 1298 ntBASIC24.3■■□□□ 1.48
DDX39AO00148 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.3■■□□□ 1.48
DDX39AO00148 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX39AO00148 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
DDX39AO00148 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.3■■□□□ 1.48
DDX39AO00148 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DDX39AO00148 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
DDX39AO00148 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
DDX39AO00148 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.29■■□□□ 1.48
DDX39AO00148 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX39AO00148 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.29■■□□□ 1.48
DDX39AO00148 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.29■■□□□ 1.48
DDX39AO00148 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
DDX39AO00148 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
DDX39AO00148 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.29■■□□□ 1.48
DDX39AO00148 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.29■■□□□ 1.48
DDX39AO00148 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
DDX39AO00148 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms