Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 ABHD17AP1-201ENST00000358206 933 ntBASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.85■■□□□ 1.09
UPK3BL1B0FP48 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 SMUG1P1-201ENST00000590640 811 ntBASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 AC073111.5-205ENST00000641717 521 ntBASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPK3BL1B0FP48 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.83■■□□□ 1.09
UPK3BL1B0FP48 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.83■■□□□ 1.09
UPK3BL1B0FP48 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.83■■□□□ 1.09
UPK3BL1B0FP48 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK3BL1B0FP48 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.83■■□□□ 1.08
UPK3BL1B0FP48 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.83■■□□□ 1.08
UPK3BL1B0FP48 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
UPK3BL1B0FP48 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPK3BL1B0FP48 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.83■■□□□ 1.08
UPK3BL1B0FP48 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 AC026185.1-201ENST00000445748 174 ntBASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 AC104771.1-201ENST00000603335 964 ntBASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.82■■□□□ 1.08
UPK3BL1B0FP48 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 AC016769.1-201ENST00000409132 1010 ntBASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK3BL1B0FP48 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 AC079089.2-201ENST00000531211 1277 ntBASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 AC137761.2-201ENST00000561729 223 ntBASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 AC145350.3-201ENST00000569033 163 ntBASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 AC087742.1-201ENST00000575880 1738 ntBASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
UPK3BL1B0FP48 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
UPK3BL1B0FP48 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.78■■□□□ 1.08
UPK3BL1B0FP48 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK3BL1B0FP48 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.78■■□□□ 1.08
UPK3BL1B0FP48 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK3BL1B0FP48 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
UPK3BL1B0FP48 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms