Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.27■□□□□ 0.36
CGB1A6NKQ9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CGB1A6NKQ9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CGB1A6NKQ9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CGB1A6NKQ9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CGB1A6NKQ9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 SRD5A1P1-201ENST00000442297 786 ntBASIC17.26■□□□□ 0.35
CGB1A6NKQ9 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 MIR4466-201ENST00000606121 54 ntBASIC17.26■□□□□ 0.35
CGB1A6NKQ9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CGB1A6NKQ9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CGB1A6NKQ9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CGB1A6NKQ9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 FAM99A-202ENST00000538190 1989 ntBASIC17.23■□□□□ 0.35
CGB1A6NKQ9 OR2I1P-207ENST00000453522 948 ntBASIC17.23■□□□□ 0.35
CGB1A6NKQ9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CGB1A6NKQ9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 AC010525.1-201ENST00000585559 441 ntBASIC17.22■□□□□ 0.35
CGB1A6NKQ9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.22■□□□□ 0.35
CGB1A6NKQ9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CGB1A6NKQ9 AC079089.2-201ENST00000531211 1277 ntBASIC17.21■□□□□ 0.35
CGB1A6NKQ9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms