Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01546A6NGU7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01546A6NGU7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC01546A6NGU7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01546A6NGU7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
LINC01546A6NGU7 C17orf82-201ENST00000623772 1530 ntBASIC15.33■□□□□ 0.05
LINC01546A6NGU7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LINC01546A6NGU7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 PKD1P6-201ENST00000343738 4769 ntBASIC15.33■□□□□ 0.04
LINC01546A6NGU7 AL049796.1-201ENST00000565336 1766 ntBASIC15.33■□□□□ 0.04
LINC01546A6NGU7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
LINC01546A6NGU7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 AF131216.4-201ENST00000638924 1588 ntBASIC15.32■□□□□ 0.04
LINC01546A6NGU7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01546A6NGU7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 SPCS2P3-201ENST00000500401 656 ntBASIC15.31■□□□□ 0.04
LINC01546A6NGU7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC01546A6NGU7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 AC022616.5-201ENST00000518796 181 ntBASIC15.3■□□□□ 0.04
LINC01546A6NGU7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 DUX4L4-201ENST00000566884 1269 ntBASIC15.3■□□□□ 0.04
LINC01546A6NGU7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC01546A6NGU7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.29■□□□□ 0.04
LINC01546A6NGU7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC01546A6NGU7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms