Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM49BA6NDI0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM49BA6NDI0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TRIM49BA6NDI0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM49BA6NDI0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TRIM49BA6NDI0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49BA6NDI0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM49BA6NDI0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM49BA6NDI0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
TRIM49BA6NDI0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM49BA6NDI0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM49BA6NDI0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 SLC47A1P1-202ENST00000449666 945 ntBASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 AC136469.2-201ENST00000623944 1028 ntBASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM49BA6NDI0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 OR7E47P-201ENST00000546390 1422 ntBASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 AL136116.3-201ENST00000402907 1138 ntBASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 AL138724.1-201ENST00000606771 1088 ntBASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms