Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRCOL1A6NCL2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LRCOL1A6NCL2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRCOL1A6NCL2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRCOL1A6NCL2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L2-201ENST00000561772 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L6-201ENST00000626483 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L1-201ENST00000627662 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L8-201ENST00000629013 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L3-201ENST00000630187 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L7-201ENST00000630678 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUX4L5-201ENST00000630834 1275 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DUSP8P3-201ENST00000399571 1760 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 AC133561.1-201ENST00000568600 2415 ntBASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCOL1A6NCL2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 LINC02228-203ENST00000641970 1355 ntBASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 OXCT2P1-201ENST00000447263 1535 ntBASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRCOL1A6NCL2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 CCDC92B-201ENST00000575506 885 ntBASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 TERF1P2-201ENST00000583350 1212 ntBASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.39□□□□□ -0.11
LRCOL1A6NCL2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 KRT18P5-201ENST00000436075 1291 ntBASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRCOL1A6NCL2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.37□□□□□ -0.11
LRCOL1A6NCL2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms