Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
C13orf42A0A1B0GVH6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C13orf42A0A1B0GVH6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 RARRES2P1-201ENST00000474487 481 ntBASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 AL031848.2-201ENST00000607670 837 ntBASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
C13orf42A0A1B0GVH6 KRT18P24-201ENST00000344739 1156 ntBASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 AC120024.1-201ENST00000562672 995 ntBASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C13orf42A0A1B0GVH6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 AC103724.3-201ENST00000564481 992 ntBASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
C13orf42A0A1B0GVH6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C13orf42A0A1B0GVH6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
C13orf42A0A1B0GVH6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C13orf42A0A1B0GVH6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C13orf42A0A1B0GVH6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
C13orf42A0A1B0GVH6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
C13orf42A0A1B0GVH6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C13orf42A0A1B0GVH6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.13■□□□□ 0.49
C13orf42A0A1B0GVH6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms