Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GUSBP5-201ENST00000418136 578 ntBASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC006455.2-201ENST00000429931 906 ntBASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MIR3181-201ENST00000578512 73 ntBASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC007375.3-201ENST00000600936 2314 ntBASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DUX4L19-201ENST00000557448 1267 ntBASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AL138724.1-201ENST00000606771 1088 ntBASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV10-1A0A0K0K1A3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TRBV10-1A0A0K0K1A3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBV10-1A0A0K0K1A3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV10-1A0A0K0K1A3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV10-1A0A0K0K1A3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV10-1A0A0K0K1A3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV10-1A0A0K0K1A3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms