Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 AC087289.5-201ENST00000586076 3175 ntBASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 AC097358.2-201ENST00000607541 1159 ntBASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV22A0A0B4J277 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 SUZ12P1-203ENST00000578195 985 ntBASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV22A0A0B4J277 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRAV22A0A0B4J277 LINC01006-201ENST00000333319 2292 ntBASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 AC244015.2-201ENST00000616358 1861 ntBASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 DUX4L28-201ENST00000623687 678 ntBASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV22A0A0B4J277 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV22A0A0B4J277 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms