Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 OXCT2P1-201ENST00000447263 1535 ntBASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV12-1A0A0B4J245 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV12-1A0A0B4J245 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 CA15P2-201ENST00000611168 834 ntBASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRAV12-1A0A0B4J245 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-1A0A0B4J245 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms