Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV25-1A0A075B6N4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 AC103834.1-201ENST00000520383 144 ntBASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TRBV25-1A0A075B6N4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 AC005703.6-201ENST00000623265 1329 ntBASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 LINC01521-201ENST00000504184 1943 ntBASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 AC144652.1-201ENST00000609974 1624 ntBASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV25-1A0A075B6N4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 BX664725.1-201ENST00000438252 379 ntBASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV25-1A0A075B6N4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 AL157384.1-201ENST00000445995 2473 ntBASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV25-1A0A075B6N4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 FAM99A-202ENST00000538190 1989 ntBASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV25-1A0A075B6N4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms