Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 MIR4787-201ENST00000607364 84 ntBASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 AC010997.5-201ENST00000609182 354 ntBASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV19A0A075B6N1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV19A0A075B6N1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV19A0A075B6N1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV19A0A075B6N1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
TRBV19A0A075B6N1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV19A0A075B6N1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 AL031602.1-201ENST00000633169 911 ntBASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV19A0A075B6N1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 AC079089.2-201ENST00000531211 1277 ntBASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV19A0A075B6N1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 AC241377.3-202ENST00000626088 1088 ntBASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 AC241585.3-202ENST00000628937 1088 ntBASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 AC245100.8-202ENST00000629247 1058 ntBASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV19A0A075B6N1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms