Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3L1Q8WWY6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3L1Q8WWY6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD3L1Q8WWY6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MBD3L1Q8WWY6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.43■■□□□ 1.02
MBD3L1Q8WWY6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD3L1Q8WWY6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MBD3L1Q8WWY6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD3L1Q8WWY6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD3L1Q8WWY6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD3L1Q8WWY6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MBD3L1Q8WWY6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD3L1Q8WWY6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD3L1Q8WWY6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD3L1Q8WWY6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD3L1Q8WWY6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.34■■□□□ 1.01
MBD3L1Q8WWY6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3L1Q8WWY6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MBD3L1Q8WWY6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 ST7-AS1-201ENST00000456775 1889 ntBASIC21.31■■□□□ 1
MBD3L1Q8WWY6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 AC142086.6-201ENST00000621154 1765 ntBASIC21.28■■□□□ 1
MBD3L1Q8WWY6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3L1Q8WWY6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3L1Q8WWY6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD3L1Q8WWY6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD3L1Q8WWY6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MBD3L1Q8WWY6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3L1Q8WWY6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3L1Q8WWY6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MBD3L1Q8WWY6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
MBD3L1Q8WWY6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD3L1Q8WWY6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MBD3L1Q8WWY6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3L1Q8WWY6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 AC015813.7-201ENST00000623294 581 ntBASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MBD3L1Q8WWY6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MBD3L1Q8WWY6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms