Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 RBG1YAL036C 1110 nt9.49□□□□□ -0.89
RRP40Q08285 ARP6YLR085C 1317 nt9.49□□□□□ -0.89
RRP40Q08285 PRP4YPR178W 1398 nt9.49□□□□□ -0.89
RRP40Q08285 YGR259CYGR259C 441 nt9.48□□□□□ -0.89
RRP40Q08285 POM34YLR018C 900 nt9.48□□□□□ -0.89
RRP40Q08285 AAC1YMR056C 930 nt9.47□□□□□ -0.89
RRP40Q08285 NDI1YML120C 1542 nt9.46□□□□□ -0.89
RRP40Q08285 PRO1YDR300C 1287 nt9.45□□□□□ -0.9
RRP40Q08285 TOM6YOR045W 186 nt9.45□□□□□ -0.9
RRP40Q08285 DPS1YLL018C 1674 nt9.43□□□□□ -0.9
RRP40Q08285 YML089CYML089C 369 nt9.43□□□□□ -0.9
RRP40Q08285 PLB1YMR008C 1995 nt9.42□□□□□ -0.9
RRP40Q08285 GLR1YPL091W 1452 nt9.41□□□□□ -0.9
RRP40Q08285 RPL4BYDR012W 1089 nt9.41□□□□□ -0.9
RRP40Q08285 BMT6YLR063W 1098 nt9.41□□□□□ -0.9
RRP40Q08285 RPL4AYBR031W 1089 nt9.41□□□□□ -0.9
RRP40Q08285 ATG15YCR068W 1563 nt9.4□□□□□ -0.9
RRP40Q08285 HIP1YGR191W 1812 nt9.4□□□□□ -0.91
RRP40Q08285 PEX2YJL210W 816 nt9.39□□□□□ -0.91
RRP40Q08285 YMR244WYMR244W 1068 nt9.39□□□□□ -0.91
RRP40Q08285 GAP1YKR039W 1809 nt9.38□□□□□ -0.91
RRP40Q08285 CLB6YGR109C 1143 nt9.37□□□□□ -0.91
RRP40Q08285 BIO5YNR056C 1686 nt9.36□□□□□ -0.91
RRP40Q08285 RPS14BYJL191W 417 nt9.36□□□□□ -0.91
RRP40Q08285 UTH1YKR042W 1098 nt9.36□□□□□ -0.91
RRP40Q08285 PBP1YGR178C 2169 nt9.36□□□□□ -0.91
RRP40Q08285 TIF6YPR016C 738 nt9.35□□□□□ -0.91
RRP40Q08285 CMP2YML057W 1815 nt9.33□□□□□ -0.92
RRP40Q08285 IRC24YIR036C 792 nt9.32□□□□□ -0.92
RRP40Q08285 CYT2YKL087C 675 nt9.32□□□□□ -0.92
RRP40Q08285 MET28YIR017C 564 nt9.31□□□□□ -0.92
RRP40Q08285 NRT1YOR071C 1797 nt9.3□□□□□ -0.92
RRP40Q08285 SNF1YDR477W 1902 nt9.29□□□□□ -0.92
RRP40Q08285 UTR1YJR049C 1593 nt9.29□□□□□ -0.92
RRP40Q08285 HSL7YBR133C 2484 nt9.27□□□□□ -0.93
RRP40Q08285 DIF1YLR437C 402 nt9.25□□□□□ -0.93
RRP40Q08285 SDH5YOL071W 489 nt9.24□□□□□ -0.93
RRP40Q08285 TSC10YBR265W 963 nt9.24□□□□□ -0.93
RRP40Q08285 RBG2YGR173W 1107 nt9.23□□□□□ -0.93
RRP40Q08285 PRM5YIL117C 957 nt9.22□□□□□ -0.93
RRP40Q08285 YMR226CYMR226C 804 nt9.22□□□□□ -0.93
RRP40Q08285 FIT3YOR383C 615 nt9.21□□□□□ -0.94
RRP40Q08285 YLR111WYLR111W 333 nt9.2□□□□□ -0.94
RRP40Q08285 YGR012WYGR012W 1182 nt9.19□□□□□ -0.94
RRP40Q08285 YAR028WYAR028W 705 nt9.19□□□□□ -0.94
RRP40Q08285 RAD23YEL037C 1197 nt9.18□□□□□ -0.94
RRP40Q08285 SAM35YHR083W 990 nt9.18□□□□□ -0.94
RRP40Q08285 YLR279WYLR279W 390 nt9.18□□□□□ -0.94
RRP40Q08285 MTG2YHR168W 1557 nt9.14□□□□□ -0.95
RRP40Q08285 ZTA1YBR046C 1005 nt9.13□□□□□ -0.95
RRP40Q08285 ALP1YNL270C 1722 nt9.12□□□□□ -0.95
RRP40Q08285 CAB5YDR196C 726 nt9.12□□□□□ -0.95
RRP40Q08285 MSB4YOL112W 1479 nt9.12□□□□□ -0.95
RRP40Q08285 ALD4YOR374W 1560 nt9.12□□□□□ -0.95
RRP40Q08285 AKR2YOR034C 2250 nt9.11□□□□□ -0.95
RRP40Q08285 YLR437C-AYLR437C-A 228 nt9.1□□□□□ -0.95
RRP40Q08285 RIB3YDR487C 627 nt9.09□□□□□ -0.95
RRP40Q08285 HIF1YLL022C 1158 nt9.09□□□□□ -0.95
RRP40Q08285 SED1YDR077W 1017 nt9.08□□□□□ -0.96
RRP40Q08285 RDN25-1RDN25-1 3396 nt9.08□□□□□ -0.96
RRP40Q08285 RDN25-2RDN25-2 3396 nt9.08□□□□□ -0.96
RRP40Q08285 YAT1YAR035W 2064 nt9.07□□□□□ -0.96
RRP40Q08285 DBP1YPL119C 1854 nt9.05□□□□□ -0.96
RRP40Q08285 YER190C-AYER190C-A 576 nt9.05□□□□□ -0.96
RRP40Q08285 YGR296C-AYGR296C-A 576 nt9.05□□□□□ -0.96
RRP40Q08285 YML133W-AYML133W-A 576 nt9.05□□□□□ -0.96
RRP40Q08285 YNL339W-AYNL339W-A 576 nt9.05□□□□□ -0.96
RRP40Q08285 YPL283W-AYPL283W-A 576 nt9.05□□□□□ -0.96
RRP40Q08285 YPL222C-AYPL222C-A 246 nt9.03□□□□□ -0.96
RRP40Q08285 HEL2YDR266C 1920 nt9.03□□□□□ -0.96
RRP40Q08285 LIP1YMR298W 453 nt9.02□□□□□ -0.97
RRP40Q08285 HXT1YHR094C 1713 nt9.01□□□□□ -0.97
RRP40Q08285 YBL086CYBL086C 1401 nt8.99□□□□□ -0.97
RRP40Q08285 SAM1YLR180W 1149 nt8.98□□□□□ -0.97
RRP40Q08285 FCY21YER060W 1587 nt8.96□□□□□ -0.97
RRP40Q08285 YPL251WYPL251W 303 nt8.96□□□□□ -0.98
RRP40Q08285 GND1YHR183W 1470 nt8.96□□□□□ -0.98
RRP40Q08285 LOT5YKL183W 921 nt8.94□□□□□ -0.98
RRP40Q08285 UGA4YDL210W 1716 nt8.94□□□□□ -0.98
RRP40Q08285 SPT20YOL148C 1815 nt8.94□□□□□ -0.98
RRP40Q08285 LEU9YOR108W 1815 nt8.94□□□□□ -0.98
RRP40Q08285 MET2YNL277W 1461 nt8.92□□□□□ -0.98
RRP40Q08285 APT2YDR441C 546 nt8.92□□□□□ -0.98
RRP40Q08285 BRR1YPR057W 1026 nt8.92□□□□□ -0.98
RRP40Q08285 SHY1YGR112W 1170 nt8.9□□□□□ -0.98
RRP40Q08285 ZRT3YKL175W 1512 nt8.9□□□□□ -0.99
RRP40Q08285 SSN3YPL042C 1668 nt8.89□□□□□ -0.99
RRP40Q08285 SMM1YNR015W 1155 nt8.89□□□□□ -0.99
RRP40Q08285 YPI1YFR003C 468 nt8.88□□□□□ -0.99
RRP40Q08285 TOA2YKL058W 369 nt8.88□□□□□ -0.99
RRP40Q08285 MEP3YPR138C 1470 nt8.88□□□□□ -0.99
RRP40Q08285 UFO1YML088W 2007 nt8.87□□□□□ -0.99
RRP40Q08285 PRY1YJL079C 900 nt8.87□□□□□ -0.99
RRP40Q08285 YMR103CYMR103C 363 nt8.86□□□□□ -0.99
RRP40Q08285 RIM8YGL045W 1629 nt8.85□□□□□ -0.99
RRP40Q08285 TRT2tT(CGU)K 72 nt8.84□□□□□ -0.99
RRP40Q08285 GID7YCL039W 2238 nt8.83□□□□□ -1
RRP40Q08285 ADH1YOL086C 1047 nt8.83□□□□□ -1
RRP40Q08285 LSB3YFR024C-A 1380 nt8.83□□□□□ -1
RRP40Q08285 URA6YKL024C 615 nt8.82□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 7 ms