Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 PUS2YGL063W 1113 nt7.01□□□□□ -1.29
LSM6Q06406 YLR235CYLR235C 399 nt7□□□□□ -1.29
LSM6Q06406 YRF1-2YER190W 5046 nt6.99□□□□□ -1.29
LSM6Q06406 YCR102CYCR102C 1107 nt6.99□□□□□ -1.29
LSM6Q06406 YPR011CYPR011C 981 nt6.99□□□□□ -1.29
LSM6Q06406 CCT2YIL142W 1584 nt6.99□□□□□ -1.29
LSM6Q06406 SHM2YLR058C 1410 nt6.97□□□□□ -1.29
LSM6Q06406 RSC8YFR037C 1674 nt6.96□□□□□ -1.29
LSM6Q06406 HXT1YHR094C 1713 nt6.96□□□□□ -1.29
LSM6Q06406 ILV2YMR108W 2064 nt6.96□□□□□ -1.29
LSM6Q06406 GAP1YKR039W 1809 nt6.96□□□□□ -1.3
LSM6Q06406 PTH1YHR189W 573 nt6.95□□□□□ -1.3
LSM6Q06406 YOR139CYOR139C 393 nt6.95□□□□□ -1.3
LSM6Q06406 BET2YPR176C 978 nt6.95□□□□□ -1.3
LSM6Q06406 ESBP6YNL125C 2022 nt6.94□□□□□ -1.3
LSM6Q06406 DBP1YPL119C 1854 nt6.94□□□□□ -1.3
LSM6Q06406 CWC15YDR163W 528 nt6.94□□□□□ -1.3
LSM6Q06406 SHY1YGR112W 1170 nt6.94□□□□□ -1.3
LSM6Q06406 PCP1YGR101W 1041 nt6.93□□□□□ -1.3
LSM6Q06406 LSC2YGR244C 1284 nt6.93□□□□□ -1.3
LSM6Q06406 YOR072WYOR072W 315 nt6.93□□□□□ -1.3
LSM6Q06406 YPR064WYPR064W 420 nt6.93□□□□□ -1.3
LSM6Q06406 GTB1YDR221W 2109 nt6.92□□□□□ -1.3
LSM6Q06406 YHR218WYHR218W 1812 nt6.92□□□□□ -1.3
LSM6Q06406 TIM17YJL143W 477 nt6.91□□□□□ -1.3
LSM6Q06406 THI72YOR192C 1800 nt6.9□□□□□ -1.3
LSM6Q06406 ZAP1YJL056C 2643 nt6.9□□□□□ -1.3
LSM6Q06406 MRP20YDR405W 792 nt6.89□□□□□ -1.31
LSM6Q06406 MEP3YPR138C 1470 nt6.89□□□□□ -1.31
LSM6Q06406 LSB6YJL100W 1824 nt6.89□□□□□ -1.31
LSM6Q06406 TAD3YLR316C 969 nt6.88□□□□□ -1.31
LSM6Q06406 ODC1YPL134C 933 nt6.88□□□□□ -1.31
LSM6Q06406 NIT1YIL164C 600 nt6.87□□□□□ -1.31
LSM6Q06406 URA6YKL024C 615 nt6.86□□□□□ -1.31
LSM6Q06406 TIR3YIL011W 810 nt6.85□□□□□ -1.31
LSM6Q06406 GAL2YLR081W 1725 nt6.84□□□□□ -1.31
LSM6Q06406 YLR415CYLR415C 339 nt6.82□□□□□ -1.32
LSM6Q06406 QDR2YIL121W 1629 nt6.82□□□□□ -1.32
LSM6Q06406 DTR1YBR180W 1719 nt6.81□□□□□ -1.32
LSM6Q06406 DIF1YLR437C 402 nt6.81□□□□□ -1.32
LSM6Q06406 PRO1YDR300C 1287 nt6.8□□□□□ -1.32
LSM6Q06406 SGT2YOR007C 1041 nt6.8□□□□□ -1.32
LSM6Q06406 YBL086CYBL086C 1401 nt6.79□□□□□ -1.32
LSM6Q06406 YKL030WYKL030W 606 nt6.79□□□□□ -1.32
LSM6Q06406 MDM35YKL053C-A 261 nt6.79□□□□□ -1.32
LSM6Q06406 BDH1YAL060W 1149 nt6.79□□□□□ -1.32
LSM6Q06406 SSL2YIL143C 2532 nt6.79□□□□□ -1.32
LSM6Q06406 MEX67YPL169C 1800 nt6.78□□□□□ -1.32
LSM6Q06406 DIG1YPL049C 1359 nt6.78□□□□□ -1.32
LSM6Q06406 HXT10YFL011W 1641 nt6.77□□□□□ -1.33
LSM6Q06406 LIP1YMR298W 453 nt6.77□□□□□ -1.33
LSM6Q06406 ATG15YCR068W 1563 nt6.77□□□□□ -1.33
LSM6Q06406 SHB17YKR043C 816 nt6.76□□□□□ -1.33
LSM6Q06406 PET8YNL003C 855 nt6.76□□□□□ -1.33
LSM6Q06406 GID8YMR135C 1368 nt6.76□□□□□ -1.33
LSM6Q06406 RFC1YOR217W 2586 nt6.76□□□□□ -1.33
LSM6Q06406 UFO1YML088W 2007 nt6.76□□□□□ -1.33
LSM6Q06406 tM(CAU)CtM(CAU)C 72 nt6.75□□□□□ -1.33
LSM6Q06406 IMT4tM(CAU)E 72 nt6.75□□□□□ -1.33
LSM6Q06406 IMT3tM(CAU)J3 72 nt6.75□□□□□ -1.33
LSM6Q06406 IMT1tM(CAU)O1 72 nt6.75□□□□□ -1.33
LSM6Q06406 IMT2tM(CAU)P 72 nt6.75□□□□□ -1.33
LSM6Q06406 ZTA1YBR046C 1005 nt6.75□□□□□ -1.33
LSM6Q06406 RET2YFR051C 1641 nt6.75□□□□□ -1.33
LSM6Q06406 NBA1YOL070C 1506 nt6.75□□□□□ -1.33
LSM6Q06406 TOK1YJL093C 2076 nt6.74□□□□□ -1.33
LSM6Q06406 SBA1YKL117W 651 nt6.74□□□□□ -1.33
LSM6Q06406 OYE3YPL171C 1203 nt6.74□□□□□ -1.33
LSM6Q06406 MDL2YPL270W 2322 nt6.74□□□□□ -1.33
LSM6Q06406 VPS62YGR141W 1404 nt6.74□□□□□ -1.33
LSM6Q06406 MTO1YGL236C 2010 nt6.73□□□□□ -1.33
LSM6Q06406 YDL086WYDL086W 822 nt6.73□□□□□ -1.33
LSM6Q06406 POM34YLR018C 900 nt6.73□□□□□ -1.33
LSM6Q06406 YML089CYML089C 369 nt6.73□□□□□ -1.33
LSM6Q06406 YKL133CYKL133C 1392 nt6.72□□□□□ -1.33
LSM6Q06406 SED1YDR077W 1017 nt6.72□□□□□ -1.33
LSM6Q06406 PHO23YNL097C 993 nt6.72□□□□□ -1.33
LSM6Q06406 LSR1LSR1 1175 nt6.72□□□□□ -1.33
LSM6Q06406 MRS6YOR370C 1812 nt6.71□□□□□ -1.33
LSM6Q06406 ACH1YBL015W 1581 nt6.71□□□□□ -1.34
LSM6Q06406 UBX6YJL048C 1191 nt6.71□□□□□ -1.34
LSM6Q06406 CWP2YKL096W-A 279 nt6.71□□□□□ -1.34
LSM6Q06406 SHH4YLR164W 507 nt6.71□□□□□ -1.34
LSM6Q06406 SAM1YLR180W 1149 nt6.71□□□□□ -1.34
LSM6Q06406 SPP2YOR148C 558 nt6.71□□□□□ -1.34
LSM6Q06406 NRT1YOR071C 1797 nt6.7□□□□□ -1.34
LSM6Q06406 LEU9YOR108W 1815 nt6.69□□□□□ -1.34
LSM6Q06406 AGP3YFL055W 1677 nt6.68□□□□□ -1.34
LSM6Q06406 FMS1YMR020W 1527 nt6.67□□□□□ -1.34
LSM6Q06406 BSP1YPR171W 1731 nt6.67□□□□□ -1.34
LSM6Q06406 RBG1YAL036C 1110 nt6.66□□□□□ -1.34
LSM6Q06406 TOA2YKL058W 369 nt6.66□□□□□ -1.34
LSM6Q06406 MIM1YOL026C 342 nt6.65□□□□□ -1.34
LSM6Q06406 YER190C-AYER190C-A 576 nt6.64□□□□□ -1.35
LSM6Q06406 YGR296C-AYGR296C-A 576 nt6.64□□□□□ -1.35
LSM6Q06406 YAR028WYAR028W 705 nt6.64□□□□□ -1.35
LSM6Q06406 YML133W-AYML133W-A 576 nt6.64□□□□□ -1.35
LSM6Q06406 YNL339W-AYNL339W-A 576 nt6.64□□□□□ -1.35
LSM6Q06406 YPL283W-AYPL283W-A 576 nt6.64□□□□□ -1.35
LSM6Q06406 YSP3YOR003W 1437 nt6.64□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms