Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 YNR029CYNR029C 1290 nt11.75□□□□□ -0.53
PRP42Q03776 YGR012WYGR012W 1182 nt11.74□□□□□ -0.53
PRP42Q03776 TSC10YBR265W 963 nt11.74□□□□□ -0.53
PRP42Q03776 PEX2YJL210W 816 nt11.73□□□□□ -0.53
PRP42Q03776 HIP1YGR191W 1812 nt11.72□□□□□ -0.53
PRP42Q03776 RIB3YDR487C 627 nt11.72□□□□□ -0.53
PRP42Q03776 YLR349WYLR349W 507 nt11.7□□□□□ -0.54
PRP42Q03776 NRT1YOR071C 1797 nt11.69□□□□□ -0.54
PRP42Q03776 POM34YLR018C 900 nt11.69□□□□□ -0.54
PRP42Q03776 FUN14YAL008W 597 nt11.67□□□□□ -0.54
PRP42Q03776 ADH7YCR105W 1086 nt11.64□□□□□ -0.55
PRP42Q03776 YJL195CYJL195C 702 nt11.64□□□□□ -0.55
PRP42Q03776 YML089CYML089C 369 nt11.64□□□□□ -0.55
PRP42Q03776 DUS1YML080W 1272 nt11.63□□□□□ -0.55
PRP42Q03776 PRO1YDR300C 1287 nt11.62□□□□□ -0.55
PRP42Q03776 MET28YIR017C 564 nt11.62□□□□□ -0.55
PRP42Q03776 PAU15YIR041W 375 nt11.62□□□□□ -0.55
PRP42Q03776 YLR279WYLR279W 390 nt11.62□□□□□ -0.55
PRP42Q03776 AQY2YLL052C 450 nt11.61□□□□□ -0.55
PRP42Q03776 LSC2YGR244C 1284 nt11.6□□□□□ -0.55
PRP42Q03776 STR3YGL184C 1398 nt11.59□□□□□ -0.55
PRP42Q03776 TIF6YPR016C 738 nt11.59□□□□□ -0.55
PRP42Q03776 ADH1YOL086C 1047 nt11.57□□□□□ -0.56
PRP42Q03776 YPL222C-AYPL222C-A 246 nt11.57□□□□□ -0.56
PRP42Q03776 ATG15YCR068W 1563 nt11.57□□□□□ -0.56
PRP42Q03776 MSB4YOL112W 1479 nt11.55□□□□□ -0.56
PRP42Q03776 RDN18-1RDN18-1 1800 nt11.52□□□□□ -0.57
PRP42Q03776 RDN18-2RDN18-2 1800 nt11.52□□□□□ -0.57
PRP42Q03776 YPI1YFR003C 468 nt11.5□□□□□ -0.57
PRP42Q03776 GPN2YOR262W 1044 nt11.5□□□□□ -0.57
PRP42Q03776 FIT3YOR383C 615 nt11.5□□□□□ -0.57
PRP42Q03776 FUR4YBR021W 1902 nt11.48□□□□□ -0.57
PRP42Q03776 YCL074WYCL074W 927 nt11.46□□□□□ -0.57
PRP42Q03776 YEL008WYEL008W 381 nt11.45□□□□□ -0.58
PRP42Q03776 LOT5YKL183W 921 nt11.43□□□□□ -0.58
PRP42Q03776 GND1YHR183W 1470 nt11.43□□□□□ -0.58
PRP42Q03776 ARP6YLR085C 1317 nt11.42□□□□□ -0.58
PRP42Q03776 CPD1YGR247W 720 nt11.41□□□□□ -0.58
PRP42Q03776 AAC1YMR056C 930 nt11.41□□□□□ -0.58
PRP42Q03776 GAP1YKR039W 1809 nt11.41□□□□□ -0.58
PRP42Q03776 YJL225CYJL225C 5277 nt11.39□□□□□ -0.59
PRP42Q03776 HSP60YLR259C 1719 nt11.38□□□□□ -0.59
PRP42Q03776 tS(GCU)LtS(GCU)L 80 nt11.37□□□□□ -0.59
PRP42Q03776 ESS1YJR017C 513 nt11.37□□□□□ -0.59
PRP42Q03776 APT2YDR441C 546 nt11.35□□□□□ -0.59
PRP42Q03776 ALP1YNL270C 1722 nt11.3□□□□□ -0.6
PRP42Q03776 SMM1YNR015W 1155 nt11.3□□□□□ -0.6
PRP42Q03776 PLB1YMR008C 1995 nt11.3□□□□□ -0.6
PRP42Q03776 ZTA1YBR046C 1005 nt11.28□□□□□ -0.6
PRP42Q03776 RTN2YDL204W 1182 nt11.27□□□□□ -0.61
PRP42Q03776 YAR028WYAR028W 705 nt11.27□□□□□ -0.61
PRP42Q03776 BOR1YNL275W 1731 nt11.26□□□□□ -0.61
PRP42Q03776 DIF1YLR437C 402 nt11.25□□□□□ -0.61
PRP42Q03776 MTG2YHR168W 1557 nt11.24□□□□□ -0.61
PRP42Q03776 NVJ2YPR091C 2313 nt11.24□□□□□ -0.61
PRP42Q03776 AKR2YOR034C 2250 nt11.24□□□□□ -0.61
PRP42Q03776 LSB3YFR024C-A 1380 nt11.23□□□□□ -0.61
PRP42Q03776 RIB2YOL066C 1776 nt11.23□□□□□ -0.61
PRP42Q03776 SEN2YLR105C 1134 nt11.21□□□□□ -0.61
PRP42Q03776 FCY21YER060W 1587 nt11.2□□□□□ -0.62
PRP42Q03776 YKR005CYKR005C 1578 nt11.2□□□□□ -0.62
PRP42Q03776 PRP4YPR178W 1398 nt11.19□□□□□ -0.62
PRP42Q03776 NAP1YKR048C 1254 nt11.18□□□□□ -0.62
PRP42Q03776 UTR1YJR049C 1593 nt11.16□□□□□ -0.62
PRP42Q03776 PUP1YOR157C 786 nt11.15□□□□□ -0.62
PRP42Q03776 DPS1YLL018C 1674 nt11.14□□□□□ -0.63
PRP42Q03776 YGR259CYGR259C 441 nt11.13□□□□□ -0.63
PRP42Q03776 VRG4YGL225W 1014 nt11.11□□□□□ -0.63
PRP42Q03776 PRY1YJL079C 900 nt11.11□□□□□ -0.63
PRP42Q03776 HXT12YIL170W 1374 nt11.11□□□□□ -0.63
PRP42Q03776 PGC1YPL206C 966 nt11.1□□□□□ -0.63
PRP42Q03776 PAU5YFL020C 369 nt11.09□□□□□ -0.63
PRP42Q03776 ALD4YOR374W 1560 nt11.06□□□□□ -0.64
PRP42Q03776 UGA4YDL210W 1716 nt11.06□□□□□ -0.64
PRP42Q03776 SNF1YDR477W 1902 nt11.05□□□□□ -0.64
PRP42Q03776 YER190C-AYER190C-A 576 nt11.05□□□□□ -0.64
PRP42Q03776 YGR296C-AYGR296C-A 576 nt11.05□□□□□ -0.64
PRP42Q03776 YML133W-AYML133W-A 576 nt11.05□□□□□ -0.64
PRP42Q03776 YNL339W-AYNL339W-A 576 nt11.05□□□□□ -0.64
PRP42Q03776 YPL283W-AYPL283W-A 576 nt11.05□□□□□ -0.64
PRP42Q03776 YBR232CYBR232C 360 nt11.05□□□□□ -0.64
PRP42Q03776 YJL055WYJL055W 738 nt11.03□□□□□ -0.64
PRP42Q03776 SED1YDR077W 1017 nt11.02□□□□□ -0.65
PRP42Q03776 STP3YLR375W 1032 nt11.02□□□□□ -0.65
PRP42Q03776 RDN37-1RDN37-1 5354 nt11.02□□□□□ -0.65
PRP42Q03776 RDN37-2RDN37-2 5354 nt11.02□□□□□ -0.65
PRP42Q03776 SAM35YHR083W 990 nt11□□□□□ -0.65
PRP42Q03776 BMT6YLR063W 1098 nt11□□□□□ -0.65
PRP42Q03776 YJL064WYJL064W 396 nt10.99□□□□□ -0.65
PRP42Q03776 CCT5YJR064W 1689 nt10.98□□□□□ -0.65
PRP42Q03776 LIP1YMR298W 453 nt10.95□□□□□ -0.66
PRP42Q03776 PRM5YIL117C 957 nt10.93□□□□□ -0.66
PRP42Q03776 IRC24YIR036C 792 nt10.93□□□□□ -0.66
PRP42Q03776 PAU19YMR325W 375 nt10.92□□□□□ -0.66
PRP42Q03776 BIO5YNR056C 1686 nt10.91□□□□□ -0.66
PRP42Q03776 ALG12YNR030W 1656 nt10.89□□□□□ -0.67
PRP42Q03776 YPL251WYPL251W 303 nt10.89□□□□□ -0.67
PRP42Q03776 CSM1YCR086W 573 nt10.88□□□□□ -0.67
PRP42Q03776 TAF13YML098W 504 nt10.88□□□□□ -0.67
PRP42Q03776 THI72YOR192C 1800 nt10.87□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms