Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.563e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-201ENST00000412877 836 ntTSL 227.97■■■□□ 2.073e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.58■■■□□ 2.013e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-209ENST00000460083 439 ntTSL 320.75■□□□□ 0.913e-6■■■■□ 19.5
HNRNPUQ00839 ZNF362-203ENST00000483388 712 ntTSL 229.12■■■□□ 2.255e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.613e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-216ENST00000551059 474 ntTSL 223.95■■□□□ 1.423e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-210ENST00000549384 891 ntTSL 523.33■■□□□ 1.333e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-219ENST00000552871 587 ntTSL 323.33■■□□□ 1.333e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-214ENST00000550542 1245 ntTSL 522.81■■□□□ 1.243e-8■■■■□ 19.4
HNRNPUQ00839 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.825e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.293e-8■■■■□ 19.4
HNRNPUQ00839 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)13.84□□□□□ -0.195e-6■■■■□ 19.4
HNRNPUQ00839 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.295e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-217ENST00000551550 547 ntTSL 412.7□□□□□ -0.383e-8■■■■□ 19.4
HNRNPUQ00839 ZNF362-204ENST00000490959 197 ntTSL 512.07□□□□□ -0.485e-6■■■■□ 19.4
HNRNPUQ00839 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.353e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-205ENST00000494172 592 ntTSL 323■■□□□ 1.273e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.253e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-202ENST00000470789 722 ntTSL 1 (best)14.94□□□□□ -0.023e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-205ENST00000568436 548 ntTSL 323.42■■□□□ 1.346e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.936e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-203ENST00000563091 572 ntTSL 411.17□□□□□ -0.626e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.156e-6■■■■□ 19.3
HNRNPUQ00839 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.6■■□□□ 1.855e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-209ENST00000562829 277 ntTSL 220.86■□□□□ 0.935e-6■■■□□ 19
HNRNPUQ00839 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.875e-6■■■□□ 19
HNRNPUQ00839 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.475e-6■■■□□ 19
HNRNPUQ00839 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC13.91□□□□□ -0.185e-6■■■□□ 19
HNRNPUQ00839 PPM1L-203ENST00000480117 1790 ntTSL 213.49□□□□□ -0.255e-6■■■□□ 19
HNRNPUQ00839 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.725e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.845e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.855e-6■■■□□ 19
HNRNPUQ00839 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.265e-6■■■□□ 19
HNRNPUQ00839 MIR600HG-201ENST00000449175 5984 ntBASIC20.58■□□□□ 0.882e-6■■■□□ 18.9
HNRNPUQ00839 MIR600HG-202ENST00000545631 5977 nt20.58■□□□□ 0.882e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-206ENST00000478973 663 ntTSL 510.6□□□□□ -0.712e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-205ENST00000471564 535 ntTSL 59.71□□□□□ -0.862e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-210ENST00000530364 285 ntTSL 39.31□□□□□ -0.922e-6■■■□□ 18.9
HNRNPUQ00839 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.992e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-208ENST00000495420 707 ntTSL 220.7■□□□□ 0.92e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-202ENST00000409628 2001 ntTSL 520.09■□□□□ 0.812e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-201ENST00000267918 1084 ntTSL 319.14■□□□□ 0.652e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.582e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-209ENST00000495764 504 ntTSL 518.58■□□□□ 0.562e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-215ENST00000570125 681 ntTSL 435.99■■■■□ 3.359e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-204ENST00000481801 651 ntTSL 331.74■■■□□ 2.679e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-203ENST00000468758 816 ntTSL 531.74■■■□□ 2.679e-6■■■□□ 18.8
HNRNPUQ00839 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.39e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.97■■□□□ 1.759e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.259e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.879e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.679e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.589e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.579e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.469e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-212ENST00000568968 461 ntTSL 217.65■□□□□ 0.429e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.389e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-211ENST00000568117 521 ntTSL 317.39■□□□□ 0.379e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.379e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-210ENST00000567908 565 ntTSL 217.24■□□□□ 0.359e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-207ENST00000565287 556 ntTSL 317.06■□□□□ 0.329e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.559e-6■■■□□ 18.8
HNRNPUQ00839 PPP1R37-206ENST00000544069 712 ntTSL 529.57■■■□□ 2.323e-6■■■□□ 18.6
HNRNPUQ00839 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.093e-6■■■□□ 18.6
HNRNPUQ00839 PPP1R37-203ENST00000496125 555 ntTSL 321.64■■□□□ 1.053e-6■■■□□ 18.6
HNRNPUQ00839 MARK4-203ENST00000587566 553 ntTSL 517.05■□□□□ 0.323e-6■■■□□ 18.6
HNRNPUQ00839 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.368e-6■■■□□ 18.4
HNRNPUQ00839 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC24.28■■□□□ 1.486e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-216ENST00000515585 484 ntTSL 318.51■□□□□ 0.556e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.346e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-213ENST00000513589 582 ntTSL 417.08■□□□□ 0.326e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-203ENST00000502426 5326 ntTSL 216.86■□□□□ 0.296e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-207ENST00000505699 5271 ntTSL 216.44■□□□□ 0.226e-7■■■□□ 18.3
HNRNPUQ00839 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.163e-6■■■□□ 18.2
HNRNPUQ00839 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.341e-11■■■□□ 18.2
HNRNPUQ00839 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.62■■■□□ 2.171e-11■■■□□ 18.2
HNRNPUQ00839 PTP4A3-205ENST00000523147 558 ntTSL 526.27■■□□□ 1.81e-11■■■□□ 18.2
HNRNPUQ00839 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.94■■■□□ 2.062e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.43■■□□□ 1.022e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.02■□□□□ 0.82e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC12.57□□□□□ -0.42e-6■■■□□ 18.2
HNRNPUQ00839 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.03■■■□□ 2.44e-6■■■□□ 18
HNRNPUQ00839 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.82■■■□□ 2.24e-6■■■□□ 18
HNRNPUQ00839 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.23■■□□□ 1.634e-6■■■□□ 18
HNRNPUQ00839 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.074e-6■■■□□ 18
HNRNPUQ00839 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.994e-6■■■□□ 18
HNRNPUQ00839 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)19.47■□□□□ 0.714e-6■■■□□ 18
HNRNPUQ00839 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.464e-6■■■□□ 18
HNRNPUQ00839 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC17.9■□□□□ 0.464e-6■■■□□ 18
HNRNPUQ00839 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC16.12■□□□□ 0.174e-6■■■□□ 18
HNRNPUQ00839 DGCR2-207ENST00000608548 518 ntTSL 215.77■□□□□ 0.124e-6■■■□□ 18
HNRNPUQ00839 DGCR2-204ENST00000473832 606 ntTSL 513.82□□□□□ -0.24e-6■■■□□ 18
HNRNPUQ00839 HOXA3-206ENST00000522788 581 ntTSL 327.08■■□□□ 1.933e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-204ENST00000521401 598 ntTSL 327.08■■□□□ 1.933e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.093e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.783e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.73e-10■■■□□ 17.9
HNRNPUQ00839 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.394e-6■■■□□ 17.7
Retrieved 100 of 2,288 protein–RNA pairs in 210.8 ms