Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.563e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-201ENST00000412877 836 ntTSL 227.97■■■□□ 2.073e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.58■■■□□ 2.013e-6■■■■□ 19.5
HNRNPUQ00839 POLR2H-209ENST00000460083 439 ntTSL 320.75■□□□□ 0.913e-6■■■■□ 19.5
HNRNPUQ00839 ZNF362-203ENST00000483388 712 ntTSL 229.12■■■□□ 2.255e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.613e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-216ENST00000551059 474 ntTSL 223.95■■□□□ 1.423e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-210ENST00000549384 891 ntTSL 523.33■■□□□ 1.333e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-219ENST00000552871 587 ntTSL 323.33■■□□□ 1.333e-8■■■■□ 19.4
HNRNPUQ00839 CORO1C-214ENST00000550542 1245 ntTSL 522.81■■□□□ 1.243e-8■■■■□ 19.4
HNRNPUQ00839 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.825e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.293e-8■■■■□ 19.4
HNRNPUQ00839 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)13.84□□□□□ -0.195e-6■■■■□ 19.4
HNRNPUQ00839 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.295e-6■■■■□ 19.4
HNRNPUQ00839 CORO1C-217ENST00000551550 547 ntTSL 412.7□□□□□ -0.383e-8■■■■□ 19.4
HNRNPUQ00839 ZNF362-204ENST00000490959 197 ntTSL 512.07□□□□□ -0.485e-6■■■■□ 19.4
HNRNPUQ00839 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.353e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-205ENST00000494172 592 ntTSL 323■■□□□ 1.273e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.253e-6■■■■□ 19.3
HNRNPUQ00839 FAM178B-202ENST00000470789 722 ntTSL 1 (best)14.94□□□□□ -0.023e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-205ENST00000568436 548 ntTSL 323.42■■□□□ 1.346e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.936e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-203ENST00000563091 572 ntTSL 411.17□□□□□ -0.626e-6■■■■□ 19.3
HNRNPUQ00839 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.156e-6■■■■□ 19.3
HNRNPUQ00839 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.6■■□□□ 1.855e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-209ENST00000562829 277 ntTSL 220.86■□□□□ 0.935e-6■■■□□ 19
HNRNPUQ00839 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.875e-6■■■□□ 19
HNRNPUQ00839 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.475e-6■■■□□ 19
HNRNPUQ00839 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC13.91□□□□□ -0.185e-6■■■□□ 19
HNRNPUQ00839 PPM1L-203ENST00000480117 1790 ntTSL 213.49□□□□□ -0.255e-6■■■□□ 19
HNRNPUQ00839 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.725e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.845e-6■■■□□ 19
HNRNPUQ00839 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.855e-6■■■□□ 19
HNRNPUQ00839 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.265e-6■■■□□ 19
HNRNPUQ00839 MIR600HG-201ENST00000449175 5984 ntBASIC20.58■□□□□ 0.882e-6■■■□□ 18.9
HNRNPUQ00839 MIR600HG-202ENST00000545631 5977 nt20.58■□□□□ 0.882e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-206ENST00000478973 663 ntTSL 510.6□□□□□ -0.712e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-205ENST00000471564 535 ntTSL 59.71□□□□□ -0.862e-6■■■□□ 18.9
HNRNPUQ00839 STRBP-210ENST00000530364 285 ntTSL 39.31□□□□□ -0.922e-6■■■□□ 18.9
HNRNPUQ00839 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.992e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-208ENST00000495420 707 ntTSL 220.7■□□□□ 0.92e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-202ENST00000409628 2001 ntTSL 520.09■□□□□ 0.812e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-201ENST00000267918 1084 ntTSL 319.14■□□□□ 0.652e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.582e-6■■■□□ 18.8
HNRNPUQ00839 ANP32A-209ENST00000495764 504 ntTSL 518.58■□□□□ 0.562e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-215ENST00000570125 681 ntTSL 435.99■■■■□ 3.359e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-204ENST00000481801 651 ntTSL 331.74■■■□□ 2.679e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-203ENST00000468758 816 ntTSL 531.74■■■□□ 2.679e-6■■■□□ 18.8
HNRNPUQ00839 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.39e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.97■■□□□ 1.759e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.259e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.879e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.679e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.589e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.579e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.469e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-212ENST00000568968 461 ntTSL 217.65■□□□□ 0.429e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.389e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-211ENST00000568117 521 ntTSL 317.39■□□□□ 0.379e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.379e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-210ENST00000567908 565 ntTSL 217.24■□□□□ 0.359e-6■■■□□ 18.8
HNRNPUQ00839 CARHSP1-207ENST00000565287 556 ntTSL 317.06■□□□□ 0.329e-6■■■□□ 18.8
HNRNPUQ00839 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.559e-6■■■□□ 18.8
HNRNPUQ00839 PPP1R37-206ENST00000544069 712 ntTSL 529.57■■■□□ 2.323e-6■■■□□ 18.6
HNRNPUQ00839 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.093e-6■■■□□ 18.6
HNRNPUQ00839 PPP1R37-203ENST00000496125 555 ntTSL 321.64■■□□□ 1.053e-6■■■□□ 18.6
HNRNPUQ00839 MARK4-203ENST00000587566 553 ntTSL 517.05■□□□□ 0.323e-6■■■□□ 18.6
HNRNPUQ00839 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.368e-6■■■□□ 18.4
HNRNPUQ00839 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC24.28■■□□□ 1.486e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-216ENST00000515585 484 ntTSL 318.51■□□□□ 0.556e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.346e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-213ENST00000513589 582 ntTSL 417.08■□□□□ 0.326e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-203ENST00000502426 5326 ntTSL 216.86■□□□□ 0.296e-7■■■□□ 18.3
HNRNPUQ00839 ABCC3-207ENST00000505699 5271 ntTSL 216.44■□□□□ 0.226e-7■■■□□ 18.3
HNRNPUQ00839 CYP11B2-201ENST00000323110 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.163e-6■■■□□ 18.2
HNRNPUQ00839 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.341e-11■■■□□ 18.2
HNRNPUQ00839 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.62■■■□□ 2.171e-11■■■□□ 18.2
HNRNPUQ00839 PTP4A3-205ENST00000523147 558 ntTSL 526.27■■□□□ 1.81e-11■■■□□ 18.2
HNRNPUQ00839 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.94■■■□□ 2.062e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.43■■□□□ 1.022e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.02■□□□□ 0.82e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■■□□ 18.2
HNRNPUQ00839 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC12.57□□□□□ -0.42e-6■■■□□ 18.2
HNRNPUQ00839 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.03■■■□□ 2.44e-6■■■□□ 18
HNRNPUQ00839 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.82■■■□□ 2.24e-6■■■□□ 18
HNRNPUQ00839 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.23■■□□□ 1.634e-6■■■□□ 18
HNRNPUQ00839 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.074e-6■■■□□ 18
HNRNPUQ00839 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.994e-6■■■□□ 18
HNRNPUQ00839 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)19.47■□□□□ 0.714e-6■■■□□ 18
HNRNPUQ00839 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.464e-6■■■□□ 18
HNRNPUQ00839 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC17.9■□□□□ 0.464e-6■■■□□ 18
HNRNPUQ00839 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC16.12■□□□□ 0.174e-6■■■□□ 18
HNRNPUQ00839 DGCR2-207ENST00000608548 518 ntTSL 215.77■□□□□ 0.124e-6■■■□□ 18
HNRNPUQ00839 DGCR2-204ENST00000473832 606 ntTSL 513.82□□□□□ -0.24e-6■■■□□ 18
HNRNPUQ00839 HOXA3-206ENST00000522788 581 ntTSL 327.08■■□□□ 1.933e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-204ENST00000521401 598 ntTSL 327.08■■□□□ 1.933e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.093e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.783e-10■■■□□ 17.9
HNRNPUQ00839 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.73e-10■■■□□ 17.9
HNRNPUQ00839 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.394e-6■■■□□ 17.7
Retrieved 100 of 2,288 protein–RNA pairs in 155 ms