Protein–RNA interactions for Protein: P62280

RPS11, 40S ribosomal protein S11, humanhuman

Known RBP eCLIP

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11P62280 SYCP2L-202ENST00000341041 3069 ntTSL 210.81□□□□□ -0.681e-323■■□□□ 12.9
RPS11P62280 FASTK-213ENST00000482806 1826 ntTSL 519.8■□□□□ 0.762e-8■■□□□ 12.8
RPS11P62280 FASTK-215ENST00000489884 1751 ntTSL 1 (best)19.05■□□□□ 0.642e-8■■□□□ 12.8
RPS11P62280 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.89■□□□□ 0.612e-8■■□□□ 12.8
RPS11P62280 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-8■■□□□ 12.8
RPS11P62280 FASTK-216ENST00000496663 818 ntTSL 217.96■□□□□ 0.472e-8■■□□□ 12.8
RPS11P62280 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.33■□□□□ 0.372e-8■■□□□ 12.8
RPS11P62280 FASTK-205ENST00000461979 720 ntTSL 517.29■□□□□ 0.362e-8■■□□□ 12.8
RPS11P62280 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.57■□□□□ 0.082e-8■■□□□ 12.8
RPS11P62280 FASTK-204ENST00000460980 1521 ntTSL 513.68□□□□□ -0.222e-8■■□□□ 12.8
RPS11P62280 RN7SL2-201ENST00000490232 300 ntBASIC10.37□□□□□ -0.757e-29■■□□□ 12.7
RPS11P62280 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC7.99□□□□□ -1.137e-29■■□□□ 12.7
RPS11P62280 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC7.31□□□□□ -1.247e-29■■□□□ 12.7
RPS11P62280 TAGLN2-204ENST00000397334 801 ntTSL 516.06■□□□□ 0.163e-6■■□□□ 12.7
RPS11P62280 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.38□□□□□ -0.273e-6■■□□□ 12.7
RPS11P62280 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.513e-6■■□□□ 12.7
RPS11P62280 TAGLN2-205ENST00000478033 1051 ntTSL 210.62□□□□□ -0.713e-6■■□□□ 12.7
RPS11P62280 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.833e-6■■□□□ 12.7
RPS11P62280 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.843e-6■■□□□ 12.7
RPS11P62280 HMGN2-204ENST00000464888 565 ntTSL 28.54□□□□□ -1.043e-8■■□□□ 12.7
RPS11P62280 HMGN2-202ENST00000460563 1045 ntTSL 58.37□□□□□ -1.073e-8■■□□□ 12.7
RPS11P62280 HADHA-204ENST00000492433 752 ntTSL 28.23□□□□□ -1.093e-6■■□□□ 12.7
RPS11P62280 HMGN2-203ENST00000463817 853 ntTSL 27.56□□□□□ -1.23e-8■■□□□ 12.7
RPS11P62280 HMGN2-208ENST00000479815 1030 ntTSL 57.56□□□□□ -1.23e-8■■□□□ 12.7
RPS11P62280 HMGN2-206ENST00000467700 932 ntTSL 26.21□□□□□ -1.423e-8■■□□□ 12.7
RPS11P62280 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.53e-8■■□□□ 12.7
RPS11P62280 HMGN2-207ENST00000468388 320 ntTSL 35.71□□□□□ -1.53e-8■■□□□ 12.7
RPS11P62280 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.883e-8■■□□□ 12.7
RPS11P62280 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.78□□□□□ -1.484e-7■■□□□ 12.5
RPS11P62280 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC10.75□□□□□ -0.692e-15■■□□□ 12.3
RPS11P62280 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.381e-323■■□□□ 12.1
RPS11P62280 RNA5SP389-201ENST00000362610 115 ntBASIC6.6□□□□□ -1.351e-323■■□□□ 12
RPS11P62280 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.43■□□□□ 0.862e-6■■□□□ 11.6
RPS11P62280 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.682e-6■■□□□ 11.6
RPS11P62280 C22orf39-204ENST00000509549 2979 ntTSL 210.65□□□□□ -0.72e-6■■□□□ 11.6
RPS11P62280 HIRA-203ENST00000452818 453 ntTSL 58.9□□□□□ -0.982e-6■■□□□ 11.6
RPS11P62280 RNA5SP370-201ENST00000362545 121 ntBASIC9.93□□□□□ -0.821e-323■■□□□ 11.6
RPS11P62280 TOP3B-206ENST00000436282 2890 ntTSL 213.77□□□□□ -0.212e-6■■□□□ 11.5
RPS11P62280 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■□□□ 11.5
RPS11P62280 TOP3B-214ENST00000457270 2956 ntTSL 513.03□□□□□ -0.322e-6■■□□□ 11.5
RPS11P62280 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.47□□□□□ -0.412e-6■■□□□ 11.5
RPS11P62280 TOP3B-213ENST00000457179 3061 ntTSL 512.23□□□□□ -0.452e-6■■□□□ 11.5
RPS11P62280 TOP3B-215ENST00000470338 624 ntTSL 511.58□□□□□ -0.562e-6■■□□□ 11.5
RPS11P62280 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.582e-6■■□□□ 11.5
RPS11P62280 TOP3B-210ENST00000444502 4163 ntTSL 29.31□□□□□ -0.922e-6■■□□□ 11.5
RPS11P62280 MT-TH-201ENST00000387441 69 ntBASIC1.59□□□□□ -2.151e-323■■□□□ 11.5
RPS11P62280 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.394e-6■■□□□ 11.4
RPS11P62280 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.584e-6■■□□□ 11.4
RPS11P62280 FLNA-206ENST00000420627 8225 ntTSL 511.4□□□□□ -0.584e-6■■□□□ 11.4
RPS11P62280 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.614e-6■■□□□ 11.4
RPS11P62280 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.694e-6■■□□□ 11.4
RPS11P62280 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.754e-6■■□□□ 11.4
RPS11P62280 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.2□□□□□ -0.784e-6■■□□□ 11.4
RPS11P62280 RNA5SP481-201ENST00000516814 122 ntBASIC0.88□□□□□ -2.274e-28■□□□□ 11.2
RPS11P62280 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-7■□□□□ 11.2
RPS11P62280 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)18.05■□□□□ 0.483e-7■□□□□ 11.2
RPS11P62280 BLVRB-203ENST00000597870 1392 ntTSL 515.46■□□□□ 0.073e-7■□□□□ 11.2
RPS11P62280 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.553e-7■□□□□ 11.2
RPS11P62280 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC11.35□□□□□ -0.593e-7■□□□□ 11.2
RPS11P62280 BLVRB-204ENST00000601346 676 ntTSL 210.08□□□□□ -0.83e-7■□□□□ 11.2
RPS11P62280 FUS-203ENST00000474990 827 ntTSL 317.86■□□□□ 0.455e-19■□□□□ 11.1
RPS11P62280 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.541e-7■□□□□ 10.8
RPS11P62280 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.07■□□□□ 0.161e-7■□□□□ 10.8
RPS11P62280 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.28□□□□□ -1.241e-7■□□□□ 10.8
RPS11P62280 COX7B-202ENST00000475465 685 ntTSL 27.18□□□□□ -1.267e-6■□□□□ 10.6
RPS11P62280 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.58□□□□□ -1.367e-6■□□□□ 10.6
RPS11P62280 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.477e-6■□□□□ 10.6
RPS11P62280 COX7B-201ENST00000373335 497 ntTSL 21.69□□□□□ -2.147e-6■□□□□ 10.6
RPS11P62280 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.628e-6■□□□□ 10.6
RPS11P62280 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.25■□□□□ 0.998e-6■□□□□ 10.6
RPS11P62280 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.82■□□□□ 0.928e-6■□□□□ 10.6
RPS11P62280 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.478e-6■□□□□ 10.6
RPS11P62280 TXNRD2-209ENST00000474308 1854 ntTSL 216.63■□□□□ 0.258e-6■□□□□ 10.6
RPS11P62280 TXNRD2-217ENST00000496729 910 ntTSL 415.66■□□□□ 0.18e-6■□□□□ 10.6
RPS11P62280 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.048e-6■□□□□ 10.6
RPS11P62280 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.168e-6■□□□□ 10.6
RPS11P62280 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.288e-6■□□□□ 10.6
RPS11P62280 LENG8-203ENST00000421200 594 ntTSL 313.09□□□□□ -0.318e-6■□□□□ 10.6
RPS11P62280 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.558e-6■□□□□ 10.6
RPS11P62280 FAM234B-202ENST00000416494 2623 ntTSL 210.34□□□□□ -0.751e-73■□□□□ 10.5
RPS11P62280 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.981e-73■□□□□ 10.5
RPS11P62280 UBR4-205ENST00000417040 6175 ntTSL 510.34□□□□□ -0.755e-6■□□□□ 10.5
RPS11P62280 UBR4-206ENST00000419533 5583 ntTSL 57.12□□□□□ -1.275e-6■□□□□ 10.5
RPS11P62280 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.465e-6■□□□□ 10.5
RPS11P62280 MT-TI-201ENST00000387365 69 ntBASIC-0.11□□□□□ -2.431e-323■□□□□ 10.2
RPS11P62280 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.071e-7■□□□□ 9.6
RPS11P62280 AES-203ENST00000585557 491 ntTSL 522.8■■□□□ 1.241e-7■□□□□ 9.6
RPS11P62280 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.545e-6■□□□□ 9.6
RPS11P62280 MICALL2-204ENST00000467394 2080 ntTSL 218.26■□□□□ 0.511e-7■□□□□ 9.6
RPS11P62280 MICALL2-209ENST00000479007 1855 ntTSL 217.62■□□□□ 0.411e-7■□□□□ 9.6
RPS11P62280 PRSS21-208ENST00000575199 679 ntTSL 217.51■□□□□ 0.395e-6■□□□□ 9.6
RPS11P62280 AES-206ENST00000586742 1666 ntTSL 315.89■□□□□ 0.131e-7■□□□□ 9.6
RPS11P62280 MICALL2-215ENST00000496184 2722 ntTSL 215.88■□□□□ 0.131e-7■□□□□ 9.6
RPS11P62280 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.67■□□□□ 0.11e-7■□□□□ 9.6
RPS11P62280 PRSS21-207ENST00000574813 873 ntTSL 315.57■□□□□ 0.085e-6■□□□□ 9.6
RPS11P62280 PRSS21-210ENST00000577043 814 ntTSL 515.51■□□□□ 0.075e-6■□□□□ 9.6
RPS11P62280 MICALL2-208ENST00000472100 5248 ntTSL 215.48■□□□□ 0.071e-7■□□□□ 9.6
RPS11P62280 PRSS21-205ENST00000571141 484 ntTSL 215.24■□□□□ 0.035e-6■□□□□ 9.6
RPS11P62280 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.021e-7■□□□□ 9.6
RPS11P62280 MICALL2-205ENST00000467783 639 ntTSL 314.74□□□□□ -0.051e-7■□□□□ 9.6
Retrieved 100 of 539 protein–RNA pairs in 22.6 ms