Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YKR005CYKR005C 1578 nt11.39□□□□□ -0.59
HDA1P53973 RPL4BYDR012W 1089 nt11.38□□□□□ -0.59
HDA1P53973 RPL4AYBR031W 1089 nt11.38□□□□□ -0.59
HDA1P53973 RBG2YGR173W 1107 nt11.37□□□□□ -0.59
HDA1P53973 LSC2YGR244C 1284 nt11.37□□□□□ -0.59
HDA1P53973 TIF6YPR016C 738 nt11.37□□□□□ -0.59
HDA1P53973 ATG15YCR068W 1563 nt11.35□□□□□ -0.59
HDA1P53973 RTN2YDL204W 1182 nt11.33□□□□□ -0.6
HDA1P53973 YGR259CYGR259C 441 nt11.33□□□□□ -0.6
HDA1P53973 GAP1YKR039W 1809 nt11.32□□□□□ -0.6
HDA1P53973 PRP4YPR178W 1398 nt11.32□□□□□ -0.6
HDA1P53973 YML089CYML089C 369 nt11.31□□□□□ -0.6
HDA1P53973 DPS1YLL018C 1674 nt11.28□□□□□ -0.6
HDA1P53973 UTH1YKR042W 1098 nt11.28□□□□□ -0.6
HDA1P53973 NRT1YOR071C 1797 nt11.28□□□□□ -0.6
HDA1P53973 CLB6YGR109C 1143 nt11.27□□□□□ -0.61
HDA1P53973 UTR1YJR049C 1593 nt11.24□□□□□ -0.61
HDA1P53973 MET28YIR017C 564 nt11.23□□□□□ -0.61
HDA1P53973 SDH5YOL071W 489 nt11.23□□□□□ -0.61
HDA1P53973 BOR1YNL275W 1731 nt11.22□□□□□ -0.61
HDA1P53973 SNF1YDR477W 1902 nt11.21□□□□□ -0.61
HDA1P53973 YGR012WYGR012W 1182 nt11.2□□□□□ -0.62
HDA1P53973 YLR279WYLR279W 390 nt11.2□□□□□ -0.62
HDA1P53973 YMR226CYMR226C 804 nt11.2□□□□□ -0.62
HDA1P53973 YLR437C-AYLR437C-A 228 nt11.19□□□□□ -0.62
HDA1P53973 DIF1YLR437C 402 nt11.19□□□□□ -0.62
HDA1P53973 MSB4YOL112W 1479 nt11.18□□□□□ -0.62
HDA1P53973 YLR111WYLR111W 333 nt11.17□□□□□ -0.62
HDA1P53973 ZTA1YBR046C 1005 nt11.17□□□□□ -0.62
HDA1P53973 TSC10YBR265W 963 nt11.17□□□□□ -0.62
HDA1P53973 PRM5YIL117C 957 nt11.15□□□□□ -0.62
HDA1P53973 RAD23YEL037C 1197 nt11.14□□□□□ -0.63
HDA1P53973 NVJ2YPR091C 2313 nt11.14□□□□□ -0.63
HDA1P53973 MTG2YHR168W 1557 nt11.11□□□□□ -0.63
HDA1P53973 BMT6YLR063W 1098 nt11.09□□□□□ -0.63
HDA1P53973 RIB3YDR487C 627 nt11.08□□□□□ -0.64
HDA1P53973 IRC24YIR036C 792 nt11.08□□□□□ -0.64
HDA1P53973 YER190C-AYER190C-A 576 nt11.06□□□□□ -0.64
HDA1P53973 YGR296C-AYGR296C-A 576 nt11.06□□□□□ -0.64
HDA1P53973 YAR028WYAR028W 705 nt11.06□□□□□ -0.64
HDA1P53973 YML133W-AYML133W-A 576 nt11.06□□□□□ -0.64
HDA1P53973 AAC1YMR056C 930 nt11.06□□□□□ -0.64
HDA1P53973 YNL339W-AYNL339W-A 576 nt11.06□□□□□ -0.64
HDA1P53973 YPL283W-AYPL283W-A 576 nt11.06□□□□□ -0.64
HDA1P53973 FIT3YOR383C 615 nt11.05□□□□□ -0.64
HDA1P53973 SAM1YLR180W 1149 nt11.04□□□□□ -0.64
HDA1P53973 AKR2YOR034C 2250 nt11.02□□□□□ -0.64
HDA1P53973 BIO5YNR056C 1686 nt11.02□□□□□ -0.64
HDA1P53973 ALP1YNL270C 1722 nt11□□□□□ -0.65
HDA1P53973 YPL222C-AYPL222C-A 246 nt10.96□□□□□ -0.65
HDA1P53973 RAD51YER095W 1203 nt10.95□□□□□ -0.66
HDA1P53973 HIF1YLL022C 1158 nt10.94□□□□□ -0.66
HDA1P53973 DBP1YPL119C 1854 nt10.93□□□□□ -0.66
HDA1P53973 UGA4YDL210W 1716 nt10.92□□□□□ -0.66
HDA1P53973 GND1YHR183W 1470 nt10.91□□□□□ -0.66
HDA1P53973 SED1YDR077W 1017 nt10.89□□□□□ -0.67
HDA1P53973 LOT5YKL183W 921 nt10.89□□□□□ -0.67
HDA1P53973 SMM1YNR015W 1155 nt10.89□□□□□ -0.67
HDA1P53973 ADH1YOL086C 1047 nt10.89□□□□□ -0.67
HDA1P53973 YPL251WYPL251W 303 nt10.89□□□□□ -0.67
HDA1P53973 FCY21YER060W 1587 nt10.89□□□□□ -0.67
HDA1P53973 ALD4YOR374W 1560 nt10.89□□□□□ -0.67
HDA1P53973 ALG12YNR030W 1656 nt10.89□□□□□ -0.67
HDA1P53973 APT2YDR441C 546 nt10.88□□□□□ -0.67
HDA1P53973 YBL086CYBL086C 1401 nt10.88□□□□□ -0.67
HDA1P53973 SAM35YHR083W 990 nt10.86□□□□□ -0.67
HDA1P53973 LIP1YMR298W 453 nt10.86□□□□□ -0.67
HDA1P53973 YNR029CYNR029C 1290 nt10.86□□□□□ -0.67
HDA1P53973 HXT1YHR094C 1713 nt10.82□□□□□ -0.68
HDA1P53973 LEU9YOR108W 1815 nt10.79□□□□□ -0.68
HDA1P53973 PRY1YJL079C 900 nt10.79□□□□□ -0.68
HDA1P53973 YJL195CYJL195C 702 nt10.79□□□□□ -0.68
HDA1P53973 YLR349WYLR349W 507 nt10.79□□□□□ -0.68
HDA1P53973 YMR103CYMR103C 363 nt10.79□□□□□ -0.68
HDA1P53973 PBP1YGR178C 2169 nt10.78□□□□□ -0.68
HDA1P53973 YPI1YFR003C 468 nt10.78□□□□□ -0.68
HDA1P53973 BRR1YPR057W 1026 nt10.78□□□□□ -0.68
HDA1P53973 FUN14YAL008W 597 nt10.77□□□□□ -0.69
HDA1P53973 RIB2YOL066C 1776 nt10.77□□□□□ -0.69
HDA1P53973 SHY1YGR112W 1170 nt10.75□□□□□ -0.69
HDA1P53973 UFO1YML088W 2007 nt10.74□□□□□ -0.69
HDA1P53973 MEP3YPR138C 1470 nt10.74□□□□□ -0.69
HDA1P53973 YJL055WYJL055W 738 nt10.73□□□□□ -0.69
HDA1P53973 STE4YOR212W 1272 nt10.73□□□□□ -0.69
HDA1P53973 TOA2YKL058W 369 nt10.72□□□□□ -0.69
HDA1P53973 CSM1YCR086W 573 nt10.71□□□□□ -0.69
HDA1P53973 GND2YGR256W 1479 nt10.7□□□□□ -0.7
HDA1P53973 LSB3YFR024C-A 1380 nt10.7□□□□□ -0.7
HDA1P53973 HXT12YIL170W 1374 nt10.69□□□□□ -0.7
HDA1P53973 RPM1RPM1 483 nt10.68□□□□□ -0.7
HDA1P53973 SAM3YPL274W 1764 nt10.65□□□□□ -0.71
HDA1P53973 VRG4YGL225W 1014 nt10.64□□□□□ -0.71
HDA1P53973 TRT2tT(CGU)K 72 nt10.64□□□□□ -0.71
HDA1P53973 SSN3YPL042C 1668 nt10.63□□□□□ -0.71
HDA1P53973 NAR1YNL240C 1476 nt10.62□□□□□ -0.71
HDA1P53973 BNI5YNL166C 1347 nt10.62□□□□□ -0.71
HDA1P53973 GPN2YOR262W 1044 nt10.62□□□□□ -0.71
HDA1P53973 YEL008WYEL008W 381 nt10.61□□□□□ -0.71
HDA1P53973 URA6YKL024C 615 nt10.59□□□□□ -0.71
HDA1P53973 NME1NME1 340 nt10.59□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms