Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 ARP6YLR085C 1317 nt10.42□□□□□ -0.74
YNL040WP53960 YGL034CYGL034C 366 nt10.42□□□□□ -0.74
YNL040WP53960 YHL019W-AYHL019W-A 594 nt10.41□□□□□ -0.74
YNL040WP53960 YAT1YAR035W 2064 nt10.41□□□□□ -0.74
YNL040WP53960 XYL2YLR070C 1071 nt10.4□□□□□ -0.74
YNL040WP53960 LSC2YGR244C 1284 nt10.39□□□□□ -0.75
YNL040WP53960 Q0182Q0182 405 nt10.38□□□□□ -0.75
YNL040WP53960 POM34YLR018C 900 nt10.38□□□□□ -0.75
YNL040WP53960 PLB1YMR008C 1995 nt10.37□□□□□ -0.75
YNL040WP53960 YCR087WYCR087W 516 nt10.37□□□□□ -0.75
YNL040WP53960 PRO1YDR300C 1287 nt10.36□□□□□ -0.75
YNL040WP53960 COQ2YNR041C 1119 nt10.36□□□□□ -0.75
YNL040WP53960 CMP2YML057W 1815 nt10.33□□□□□ -0.76
YNL040WP53960 MRP20YDR405W 792 nt10.33□□□□□ -0.76
YNL040WP53960 TOM6YOR045W 186 nt10.33□□□□□ -0.76
YNL040WP53960 AIM45YPR004C 1035 nt10.32□□□□□ -0.76
YNL040WP53960 YML089CYML089C 369 nt10.31□□□□□ -0.76
YNL040WP53960 GAP1YKR039W 1809 nt10.3□□□□□ -0.76
YNL040WP53960 ATG15YCR068W 1563 nt10.28□□□□□ -0.76
YNL040WP53960 RBG1YAL036C 1110 nt10.28□□□□□ -0.76
YNL040WP53960 PEX2YJL210W 816 nt10.26□□□□□ -0.77
YNL040WP53960 HIP1YGR191W 1812 nt10.23□□□□□ -0.77
YNL040WP53960 NDI1YML120C 1542 nt10.23□□□□□ -0.77
YNL040WP53960 UTR1YJR049C 1593 nt10.22□□□□□ -0.77
YNL040WP53960 RPL4BYDR012W 1089 nt10.22□□□□□ -0.77
YNL040WP53960 RPL4AYBR031W 1089 nt10.22□□□□□ -0.77
YNL040WP53960 TIF6YPR016C 738 nt10.22□□□□□ -0.77
YNL040WP53960 PRM5YIL117C 957 nt10.21□□□□□ -0.77
YNL040WP53960 HIF1YLL022C 1158 nt10.21□□□□□ -0.77
YNL040WP53960 HSL7YBR133C 2484 nt10.21□□□□□ -0.78
YNL040WP53960 CLB6YGR109C 1143 nt10.19□□□□□ -0.78
YNL040WP53960 RPS14BYJL191W 417 nt10.17□□□□□ -0.78
YNL040WP53960 UTH1YKR042W 1098 nt10.17□□□□□ -0.78
YNL040WP53960 MET28YIR017C 564 nt10.15□□□□□ -0.78
YNL040WP53960 NRT1YOR071C 1797 nt10.15□□□□□ -0.78
YNL040WP53960 DIF1YLR437C 402 nt10.14□□□□□ -0.79
YNL040WP53960 RPC82YPR190C 1965 nt10.13□□□□□ -0.79
YNL040WP53960 ALD4YOR374W 1560 nt10.13□□□□□ -0.79
YNL040WP53960 GLR1YPL091W 1452 nt10.11□□□□□ -0.79
YNL040WP53960 SPT20YOL148C 1815 nt10.1□□□□□ -0.79
YNL040WP53960 SAM35YHR083W 990 nt10.09□□□□□ -0.79
YNL040WP53960 YMR244WYMR244W 1068 nt10.07□□□□□ -0.8
YNL040WP53960 INA1YLR413W 2028 nt10.06□□□□□ -0.8
YNL040WP53960 YAR028WYAR028W 705 nt10.05□□□□□ -0.8
YNL040WP53960 FIT3YOR383C 615 nt10.04□□□□□ -0.8
YNL040WP53960 TSC10YBR265W 963 nt10.02□□□□□ -0.81
YNL040WP53960 MTG2YHR168W 1557 nt10.01□□□□□ -0.81
YNL040WP53960 SDH5YOL071W 489 nt10.01□□□□□ -0.81
YNL040WP53960 ZTA1YBR046C 1005 nt9.99□□□□□ -0.81
YNL040WP53960 YLR279WYLR279W 390 nt9.98□□□□□ -0.81
YNL040WP53960 ALP1YNL270C 1722 nt9.97□□□□□ -0.81
YNL040WP53960 YGR012WYGR012W 1182 nt9.97□□□□□ -0.81
YNL040WP53960 AKR2YOR034C 2250 nt9.96□□□□□ -0.81
YNL040WP53960 DBP1YPL119C 1854 nt9.96□□□□□ -0.81
YNL040WP53960 YER190C-AYER190C-A 576 nt9.95□□□□□ -0.82
YNL040WP53960 YGR296C-AYGR296C-A 576 nt9.95□□□□□ -0.82
YNL040WP53960 YML133W-AYML133W-A 576 nt9.95□□□□□ -0.82
YNL040WP53960 YNL339W-AYNL339W-A 576 nt9.95□□□□□ -0.82
YNL040WP53960 YPL283W-AYPL283W-A 576 nt9.95□□□□□ -0.82
YNL040WP53960 SED1YDR077W 1017 nt9.94□□□□□ -0.82
YNL040WP53960 RDN25-1RDN25-1 3396 nt9.93□□□□□ -0.82
YNL040WP53960 RDN25-2RDN25-2 3396 nt9.93□□□□□ -0.82
YNL040WP53960 RAD23YEL037C 1197 nt9.93□□□□□ -0.82
YNL040WP53960 YLR111WYLR111W 333 nt9.93□□□□□ -0.82
YNL040WP53960 MSB4YOL112W 1479 nt9.92□□□□□ -0.82
YNL040WP53960 YMR226CYMR226C 804 nt9.92□□□□□ -0.82
YNL040WP53960 HXT1YHR094C 1713 nt9.92□□□□□ -0.82
YNL040WP53960 ZRT3YKL175W 1512 nt9.92□□□□□ -0.82
YNL040WP53960 LIP1YMR298W 453 nt9.91□□□□□ -0.82
YNL040WP53960 YJL067WYJL067W 351 nt9.9□□□□□ -0.82
YNL040WP53960 CAB5YDR196C 726 nt9.89□□□□□ -0.83
YNL040WP53960 RBG2YGR173W 1107 nt9.89□□□□□ -0.83
YNL040WP53960 YBL086CYBL086C 1401 nt9.89□□□□□ -0.83
YNL040WP53960 MUP1YGR055W 1725 nt9.88□□□□□ -0.83
YNL040WP53960 RIM8YGL045W 1629 nt9.85□□□□□ -0.83
YNL040WP53960 RIB3YDR487C 627 nt9.84□□□□□ -0.83
YNL040WP53960 YLR437C-AYLR437C-A 228 nt9.84□□□□□ -0.83
YNL040WP53960 SHY1YGR112W 1170 nt9.83□□□□□ -0.84
YNL040WP53960 YPL222C-AYPL222C-A 246 nt9.83□□□□□ -0.84
YNL040WP53960 YPL251WYPL251W 303 nt9.83□□□□□ -0.84
YNL040WP53960 LEU9YOR108W 1815 nt9.82□□□□□ -0.84
YNL040WP53960 HEL2YDR266C 1920 nt9.82□□□□□ -0.84
YNL040WP53960 HOL1YNR055C 1761 nt9.82□□□□□ -0.84
YNL040WP53960 SAM1YLR180W 1149 nt9.8□□□□□ -0.84
YNL040WP53960 BRR1YPR057W 1026 nt9.79□□□□□ -0.84
YNL040WP53960 TOA2YKL058W 369 nt9.78□□□□□ -0.84
YNL040WP53960 YOR325WYOR325W 474 nt9.77□□□□□ -0.85
YNL040WP53960 UGA4YDL210W 1716 nt9.76□□□□□ -0.85
YNL040WP53960 FCY21YER060W 1587 nt9.76□□□□□ -0.85
YNL040WP53960 UFO1YML088W 2007 nt9.75□□□□□ -0.85
YNL040WP53960 YGL114WYGL114W 2178 nt9.74□□□□□ -0.85
YNL040WP53960 YMR103CYMR103C 363 nt9.74□□□□□ -0.85
YNL040WP53960 MEP3YPR138C 1470 nt9.73□□□□□ -0.85
YNL040WP53960 APT2YDR441C 546 nt9.73□□□□□ -0.85
YNL040WP53960 YNL024CYNL024C 741 nt9.73□□□□□ -0.85
YNL040WP53960 URA6YKL024C 615 nt9.72□□□□□ -0.85
YNL040WP53960 GND1YHR183W 1470 nt9.72□□□□□ -0.85
YNL040WP53960 GND2YGR256W 1479 nt9.71□□□□□ -0.86
YNL040WP53960 TRT2tT(CGU)K 72 nt9.69□□□□□ -0.86
YNL040WP53960 LOT5YKL183W 921 nt9.69□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 45.7 ms