Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 ARP6YLR085C 1317 nt10.17□□□□□ -0.78
NRD1P53617 RTN2YDL204W 1182 nt10.17□□□□□ -0.78
NRD1P53617 PRO1YDR300C 1287 nt10.17□□□□□ -0.78
NRD1P53617 MRP20YDR405W 792 nt10.17□□□□□ -0.78 RIP-Chip
NRD1P53617 YGR259CYGR259C 441 nt10.17□□□□□ -0.78
NRD1P53617 TOM6YOR045W 186 nt10.17□□□□□ -0.78
NRD1P53617 NDI1YML120C 1542 nt10.17□□□□□ -0.78
NRD1P53617 LSC2YGR244C 1284 nt10.14□□□□□ -0.79
NRD1P53617 DPS1YLL018C 1674 nt10.14□□□□□ -0.79
NRD1P53617 PLB1YMR008C 1995 nt10.14□□□□□ -0.79
NRD1P53617 YMR244WYMR244W 1068 nt10.11□□□□□ -0.79
NRD1P53617 PEX2YJL210W 816 nt10.1□□□□□ -0.79 RIP-Chip
NRD1P53617 GLR1YPL091W 1452 nt10.1□□□□□ -0.79
NRD1P53617 HIP1YGR191W 1812 nt10.09□□□□□ -0.79 RIP-Chip
NRD1P53617 YML089CYML089C 369 nt10.08□□□□□ -0.8
NRD1P53617 ATG15YCR068W 1563 nt10.08□□□□□ -0.8
NRD1P53617 MCH5YOR306C 1566 nt10.08□□□□□ -0.8 RIP-Chip
NRD1P53617 RPL4BYDR012W 1089 nt10.07□□□□□ -0.8
NRD1P53617 RPL4AYBR031W 1089 nt10.07□□□□□ -0.8
NRD1P53617 GAP1YKR039W 1809 nt10.07□□□□□ -0.8
NRD1P53617 Q0142Q0142 177 nt10.06□□□□□ -0.8
NRD1P53617 TIF6YPR016C 738 nt10.06□□□□□ -0.8
NRD1P53617 BMT6YLR063W 1098 nt10.05□□□□□ -0.8
NRD1P53617 RPS14BYJL191W 417 nt10.04□□□□□ -0.8
NRD1P53617 CLB6YGR109C 1143 nt10.02□□□□□ -0.81
NRD1P53617 SNF1YDR477W 1902 nt10.01□□□□□ -0.81 RIP-Chip
NRD1P53617 UTH1YKR042W 1098 nt10.01□□□□□ -0.81
NRD1P53617 IRC24YIR036C 792 nt9.99□□□□□ -0.81
NRD1P53617 AAC1YMR056C 930 nt9.99□□□□□ -0.81
NRD1P53617 UTR1YJR049C 1593 nt9.99□□□□□ -0.81 RIP-Chip
NRD1P53617 NRT1YOR071C 1797 nt9.98□□□□□ -0.81 RIP-Chip
NRD1P53617 MET28YIR017C 564 nt9.97□□□□□ -0.81
NRD1P53617 DIF1YLR437C 402 nt9.94□□□□□ -0.82
NRD1P53617 PRM5YIL117C 957 nt9.92□□□□□ -0.82 RIP-Chip
NRD1P53617 RBG2YGR173W 1107 nt9.91□□□□□ -0.82
NRD1P53617 SDH5YOL071W 489 nt9.9□□□□□ -0.82
NRD1P53617 TSC10YBR265W 963 nt9.89□□□□□ -0.83
NRD1P53617 ALG12YNR030W 1656 nt9.89□□□□□ -0.83
NRD1P53617 Q0144Q0144 330 nt9.88□□□□□ -0.83
NRD1P53617 PAM17YKR065C 594 nt9.88□□□□□ -0.83
NRD1P53617 BIO5YNR056C 1686 nt9.87□□□□□ -0.83
NRD1P53617 CAB5YDR196C 726 nt9.87□□□□□ -0.83 RIP-Chip
NRD1P53617 YGR012WYGR012W 1182 nt9.86□□□□□ -0.83
NRD1P53617 YLR279WYLR279W 390 nt9.86□□□□□ -0.83
NRD1P53617 YMR226CYMR226C 804 nt9.86□□□□□ -0.83
NRD1P53617 YLR111WYLR111W 333 nt9.84□□□□□ -0.83
NRD1P53617 YAR028WYAR028W 705 nt9.84□□□□□ -0.83
NRD1P53617 FIT3YOR383C 615 nt9.84□□□□□ -0.83 RIP-Chip
NRD1P53617 ZTA1YBR046C 1005 nt9.84□□□□□ -0.83 RIP-Chip
NRD1P53617 MTG2YHR168W 1557 nt9.84□□□□□ -0.83
NRD1P53617 RAD23YEL037C 1197 nt9.83□□□□□ -0.84
NRD1P53617 MSB4YOL112W 1479 nt9.82□□□□□ -0.84
NRD1P53617 CSM2YIL132C 642 nt9.79□□□□□ -0.84
NRD1P53617 YLR437C-AYLR437C-A 228 nt9.79□□□□□ -0.84
NRD1P53617 SAM35YHR083W 990 nt9.78□□□□□ -0.84
NRD1P53617 AKR2YOR034C 2250 nt9.78□□□□□ -0.84
NRD1P53617 ALP1YNL270C 1722 nt9.77□□□□□ -0.85
NRD1P53617 ALD4YOR374W 1560 nt9.77□□□□□ -0.85 RIP-Chip
NRD1P53617 YER190C-AYER190C-A 576 nt9.77□□□□□ -0.85
NRD1P53617 YGR296C-AYGR296C-A 576 nt9.77□□□□□ -0.85
NRD1P53617 HIF1YLL022C 1158 nt9.77□□□□□ -0.85
NRD1P53617 YML133W-AYML133W-A 576 nt9.77□□□□□ -0.85
NRD1P53617 YNL339W-AYNL339W-A 576 nt9.77□□□□□ -0.85
NRD1P53617 YPL283W-AYPL283W-A 576 nt9.77□□□□□ -0.85
NRD1P53617 RIB3YDR487C 627 nt9.75□□□□□ -0.85 RIP-Chip
NRD1P53617 NME1NME1 340 nt9.75□□□□□ -0.85
NRD1P53617 DBP1YPL119C 1854 nt9.73□□□□□ -0.85
NRD1P53617 PAU21YOR394W 495 nt9.72□□□□□ -0.85
NRD1P53617 PAU22YPL282C 495 nt9.72□□□□□ -0.85
NRD1P53617 SED1YDR077W 1017 nt9.71□□□□□ -0.86
NRD1P53617 LIP1YMR298W 453 nt9.68□□□□□ -0.86 RIP-Chip
NRD1P53617 YPL222C-AYPL222C-A 246 nt9.68□□□□□ -0.86
NRD1P53617 PBP1YGR178C 2169 nt9.68□□□□□ -0.86
NRD1P53617 ARO7YPR060C 771 nt9.67□□□□□ -0.86
NRD1P53617 HXT1YHR094C 1713 nt9.67□□□□□ -0.86 RIP-Chip
NRD1P53617 YBL086CYBL086C 1401 nt9.66□□□□□ -0.86
NRD1P53617 YPL251WYPL251W 303 nt9.64□□□□□ -0.87
NRD1P53617 UGA4YDL210W 1716 nt9.62□□□□□ -0.87
NRD1P53617 BMT5YIL096C 1011 nt9.62□□□□□ -0.87 RIP-Chip
NRD1P53617 SAM1YLR180W 1149 nt9.62□□□□□ -0.87
NRD1P53617 FCY21YER060W 1587 nt9.62□□□□□ -0.87
NRD1P53617 GND1YHR183W 1470 nt9.61□□□□□ -0.87
NRD1P53617 SEM1YDR363W-A 270 nt9.61□□□□□ -0.87 RIP-Chip
NRD1P53617 NAR1YNL240C 1476 nt9.6□□□□□ -0.87
NRD1P53617 AI5_BETAQ0075 1065 nt9.6□□□□□ -0.87 RIP-Chip
NRD1P53617 LEU9YOR108W 1815 nt9.6□□□□□ -0.87
NRD1P53617 BUR6YER159C 429 nt9.59□□□□□ -0.87 RIP-Chip
NRD1P53617 LOT5YKL183W 921 nt9.59□□□□□ -0.87
NRD1P53617 SHY1YGR112W 1170 nt9.58□□□□□ -0.88
NRD1P53617 SMM1YNR015W 1155 nt9.58□□□□□ -0.88
NRD1P53617 BRR1YPR057W 1026 nt9.58□□□□□ -0.88
NRD1P53617 CYT2YKL087C 675 nt9.56□□□□□ -0.88 RIP-Chip
NRD1P53617 Q0255Q0255 1419 nt9.56□□□□□ -0.88
NRD1P53617 YMR103CYMR103C 363 nt9.55□□□□□ -0.88
NRD1P53617 MEP3YPR138C 1470 nt9.54□□□□□ -0.88
NRD1P53617 APT2YDR441C 546 nt9.54□□□□□ -0.88 RIP-Chip
NRD1P53617 TOA2YKL058W 369 nt9.54□□□□□ -0.88
NRD1P53617 UFO1YML088W 2007 nt9.54□□□□□ -0.88
NRD1P53617 PRY1YJL079C 900 nt9.52□□□□□ -0.89
NRD1P53617 REG2YBR050C 1017 nt9.52□□□□□ -0.89
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms