Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 PAC11YDR488C 1602 nt10.71□□□□□ -0.69 RIP-Chip
SCD6P45978 TOM6YOR045W 186 nt10.71□□□□□ -0.69
SCD6P45978 ARP6YLR085C 1317 nt10.69□□□□□ -0.7
SCD6P45978 RPS14BYJL191W 417 nt10.69□□□□□ -0.7
SCD6P45978 UTH1YKR042W 1098 nt10.69□□□□□ -0.7
SCD6P45978 PRO1YDR300C 1287 nt10.68□□□□□ -0.7
SCD6P45978 RTN2YDL204W 1182 nt10.67□□□□□ -0.7
SCD6P45978 HIP1YGR191W 1812 nt10.66□□□□□ -0.7
SCD6P45978 PEX2YJL210W 816 nt10.65□□□□□ -0.7 RIP-Chip
SCD6P45978 YLR111WYLR111W 333 nt10.63□□□□□ -0.71
SCD6P45978 ATG15YCR068W 1563 nt10.63□□□□□ -0.71
SCD6P45978 SDH5YOL071W 489 nt10.62□□□□□ -0.71
SCD6P45978 NRT1YOR071C 1797 nt10.62□□□□□ -0.71 RIP-Chip
SCD6P45978 TIF6YPR016C 738 nt10.61□□□□□ -0.71
SCD6P45978 MET28YIR017C 564 nt10.6□□□□□ -0.71
SCD6P45978 TSC10YBR265W 963 nt10.59□□□□□ -0.71 RIP-Chip
SCD6P45978 YKR005CYKR005C 1578 nt10.58□□□□□ -0.72
SCD6P45978 GAP1YKR039W 1809 nt10.58□□□□□ -0.72
SCD6P45978 RAD23YEL037C 1197 nt10.57□□□□□ -0.72
SCD6P45978 YGR259CYGR259C 441 nt10.57□□□□□ -0.72
SCD6P45978 PLB1YMR008C 1995 nt10.56□□□□□ -0.72
SCD6P45978 HSP60YLR259C 1719 nt10.55□□□□□ -0.72 RIP-Chip
SCD6P45978 PRP4YPR178W 1398 nt10.52□□□□□ -0.72 RIP-Chip
SCD6P45978 YGR012WYGR012W 1182 nt10.52□□□□□ -0.73 RIP-Chip
SCD6P45978 FIT3YOR383C 615 nt10.52□□□□□ -0.73 RIP-Chip
SCD6P45978 BMT6YLR063W 1098 nt10.48□□□□□ -0.73
SCD6P45978 SAM1YLR180W 1149 nt10.46□□□□□ -0.73 RIP-Chip
SCD6P45978 YLR279WYLR279W 390 nt10.46□□□□□ -0.73
SCD6P45978 RIB3YDR487C 627 nt10.45□□□□□ -0.74 RIP-Chip
SCD6P45978 YLR437C-AYLR437C-A 228 nt10.45□□□□□ -0.74
SCD6P45978 DPS1YLL018C 1674 nt10.44□□□□□ -0.74
SCD6P45978 DIF1YLR437C 402 nt10.44□□□□□ -0.74
SCD6P45978 YAR028WYAR028W 705 nt10.42□□□□□ -0.74
SCD6P45978 UTR1YJR049C 1593 nt10.42□□□□□ -0.74
SCD6P45978 BOR1YNL275W 1731 nt10.41□□□□□ -0.74
SCD6P45978 CAB5YDR196C 726 nt10.4□□□□□ -0.74 RIP-Chip
SCD6P45978 MSB4YOL112W 1479 nt10.39□□□□□ -0.75
SCD6P45978 IRC24YIR036C 792 nt10.39□□□□□ -0.75 RIP-Chip
SCD6P45978 ALP1YNL270C 1722 nt10.37□□□□□ -0.75
SCD6P45978 YPL222C-AYPL222C-A 246 nt10.37□□□□□ -0.75
SCD6P45978 SAM35YHR083W 990 nt10.36□□□□□ -0.75
SCD6P45978 AAC1YMR056C 930 nt10.33□□□□□ -0.76 RIP-Chip
SCD6P45978 MTG2YHR168W 1557 nt10.33□□□□□ -0.76
SCD6P45978 AKR2YOR034C 2250 nt10.33□□□□□ -0.76 RIP-Chip
SCD6P45978 ZTA1YBR046C 1005 nt10.31□□□□□ -0.76
SCD6P45978 PRM5YIL117C 957 nt10.3□□□□□ -0.76
SCD6P45978 GND1YHR183W 1470 nt10.25□□□□□ -0.77
SCD6P45978 SED1YDR077W 1017 nt10.24□□□□□ -0.77
SCD6P45978 YPI1YFR003C 468 nt10.24□□□□□ -0.77
SCD6P45978 LOT5YKL183W 921 nt10.23□□□□□ -0.77
SCD6P45978 SNF1YDR477W 1902 nt10.23□□□□□ -0.77
SCD6P45978 FCY21YER060W 1587 nt10.2□□□□□ -0.78
SCD6P45978 ALD4YOR374W 1560 nt10.2□□□□□ -0.78
SCD6P45978 ADH1YOL086C 1047 nt10.19□□□□□ -0.78
SCD6P45978 APT2YDR441C 546 nt10.18□□□□□ -0.78
SCD6P45978 LIP1YMR298W 453 nt10.18□□□□□ -0.78
SCD6P45978 YER190C-AYER190C-A 576 nt10.17□□□□□ -0.78
SCD6P45978 YGR296C-AYGR296C-A 576 nt10.17□□□□□ -0.78
SCD6P45978 YJL195CYJL195C 702 nt10.17□□□□□ -0.78
SCD6P45978 YML133W-AYML133W-A 576 nt10.17□□□□□ -0.78
SCD6P45978 YNL339W-AYNL339W-A 576 nt10.17□□□□□ -0.78
SCD6P45978 YPL283W-AYPL283W-A 576 nt10.17□□□□□ -0.78
SCD6P45978 FUN14YAL008W 597 nt10.16□□□□□ -0.78
SCD6P45978 DBP1YPL119C 1854 nt10.15□□□□□ -0.78
SCD6P45978 SMM1YNR015W 1155 nt10.15□□□□□ -0.78
SCD6P45978 YNR029CYNR029C 1290 nt10.14□□□□□ -0.79 RIP-Chip
SCD6P45978 HXT1YHR094C 1713 nt10.13□□□□□ -0.79
SCD6P45978 STE4YOR212W 1272 nt10.13□□□□□ -0.79
SCD6P45978 HIF1YLL022C 1158 nt10.12□□□□□ -0.79
SCD6P45978 LSB3YFR024C-A 1380 nt10.11□□□□□ -0.79
SCD6P45978 UGA4YDL210W 1716 nt10.1□□□□□ -0.79
SCD6P45978 YBL086CYBL086C 1401 nt10.09□□□□□ -0.79
SCD6P45978 RAD51YER095W 1203 nt10.08□□□□□ -0.8 RIP-Chip
SCD6P45978 YLR349WYLR349W 507 nt10.08□□□□□ -0.8
SCD6P45978 YPL251WYPL251W 303 nt10.08□□□□□ -0.8
SCD6P45978 BIO5YNR056C 1686 nt10.07□□□□□ -0.8
SCD6P45978 PRY1YJL079C 900 nt10.07□□□□□ -0.8
SCD6P45978 LEU9YOR108W 1815 nt10.07□□□□□ -0.8 RIP-Chip
SCD6P45978 BRR1YPR057W 1026 nt10.05□□□□□ -0.8 RIP-Chip
SCD6P45978 HXT12YIL170W 1374 nt10.04□□□□□ -0.8
SCD6P45978 ALG12YNR030W 1656 nt10.03□□□□□ -0.8
SCD6P45978 YEL008WYEL008W 381 nt10.03□□□□□ -0.8
SCD6P45978 MEP3YPR138C 1470 nt10.03□□□□□ -0.8 RIP-Chip
SCD6P45978 TOA2YKL058W 369 nt10.02□□□□□ -0.81
SCD6P45978 RIB2YOL066C 1776 nt10.01□□□□□ -0.81
SCD6P45978 VRG4YGL225W 1014 nt9.99□□□□□ -0.81
SCD6P45978 YMR103CYMR103C 363 nt9.99□□□□□ -0.81
SCD6P45978 ADH7YCR105W 1086 nt9.98□□□□□ -0.81
SCD6P45978 SHY1YGR112W 1170 nt9.98□□□□□ -0.81
SCD6P45978 NVJ2YPR091C 2313 nt9.97□□□□□ -0.81 RIP-Chip
SCD6P45978 TRT2tT(CGU)K 72 nt9.95□□□□□ -0.82
SCD6P45978 ZRT3YKL175W 1512 nt9.95□□□□□ -0.82 RIP-Chip
SCD6P45978 CSM1YCR086W 573 nt9.94□□□□□ -0.82
SCD6P45978 UFO1YML088W 2007 nt9.94□□□□□ -0.82
SCD6P45978 GND2YGR256W 1479 nt9.93□□□□□ -0.82
SCD6P45978 PAU15YIR041W 375 nt9.93□□□□□ -0.82 RIP-Chip
SCD6P45978 CPD1YGR247W 720 nt9.92□□□□□ -0.82
SCD6P45978 YJL055WYJL055W 738 nt9.92□□□□□ -0.82
SCD6P45978 URA6YKL024C 615 nt9.92□□□□□ -0.82 RIP-Chip
SCD6P45978 LSB5YCL034W 1065 nt9.92□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 98.5 ms