Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 RTN2YDL204W 1182 nt14.37□□□□□ -0.11
SSM4P40318 ARP6YLR085C 1317 nt14.36□□□□□ -0.11
SSM4P40318 RPL4BYDR012W 1089 nt14.36□□□□□ -0.11
SSM4P40318 YGR259CYGR259C 441 nt14.36□□□□□ -0.11
SSM4P40318 RPL4AYBR031W 1089 nt14.36□□□□□ -0.11
SSM4P40318 RBG2YGR173W 1107 nt14.34□□□□□ -0.11
SSM4P40318 PRP4YPR178W 1398 nt14.33□□□□□ -0.12
SSM4P40318 TIF6YPR016C 738 nt14.32□□□□□ -0.12
SSM4P40318 SDH5YOL071W 489 nt14.3□□□□□ -0.12
SSM4P40318 GAP1YKR039W 1809 nt14.29□□□□□ -0.12
SSM4P40318 LSC2YGR244C 1284 nt14.28□□□□□ -0.12
SSM4P40318 DPS1YLL018C 1674 nt14.26□□□□□ -0.13
SSM4P40318 UTH1YKR042W 1098 nt14.26□□□□□ -0.13
SSM4P40318 NRT1YOR071C 1797 nt14.25□□□□□ -0.13
SSM4P40318 YML089CYML089C 369 nt14.23□□□□□ -0.13
SSM4P40318 BOR1YNL275W 1731 nt14.22□□□□□ -0.13
SSM4P40318 UTR1YJR049C 1593 nt14.22□□□□□ -0.13
SSM4P40318 CLB6YGR109C 1143 nt14.2□□□□□ -0.14
SSM4P40318 SNF1YDR477W 1902 nt14.18□□□□□ -0.14
SSM4P40318 YLR111WYLR111W 333 nt14.17□□□□□ -0.14
SSM4P40318 ZTA1YBR046C 1005 nt14.17□□□□□ -0.14
SSM4P40318 YGR012WYGR012W 1182 nt14.16□□□□□ -0.14
SSM4P40318 PRM5YIL117C 957 nt14.16□□□□□ -0.14
SSM4P40318 MSB4YOL112W 1479 nt14.14□□□□□ -0.15
SSM4P40318 MET28YIR017C 564 nt14.14□□□□□ -0.15
SSM4P40318 YLR279WYLR279W 390 nt14.14□□□□□ -0.15
SSM4P40318 DIF1YLR437C 402 nt14.12□□□□□ -0.15
SSM4P40318 BMT6YLR063W 1098 nt14.11□□□□□ -0.15
SSM4P40318 TSC10YBR265W 963 nt14.1□□□□□ -0.15
SSM4P40318 YLR437C-AYLR437C-A 228 nt14.07□□□□□ -0.16
SSM4P40318 YMR226CYMR226C 804 nt14.05□□□□□ -0.16
SSM4P40318 AKR2YOR034C 2250 nt14.03□□□□□ -0.16
SSM4P40318 RAD23YEL037C 1197 nt14.01□□□□□ -0.17
SSM4P40318 YER190C-AYER190C-A 576 nt13.99□□□□□ -0.17
SSM4P40318 YGR296C-AYGR296C-A 576 nt13.99□□□□□ -0.17
SSM4P40318 YML133W-AYML133W-A 576 nt13.99□□□□□ -0.17
SSM4P40318 AAC1YMR056C 930 nt13.99□□□□□ -0.17
SSM4P40318 YNL339W-AYNL339W-A 576 nt13.99□□□□□ -0.17
SSM4P40318 YPL283W-AYPL283W-A 576 nt13.99□□□□□ -0.17
SSM4P40318 MTG2YHR168W 1557 nt13.99□□□□□ -0.17
SSM4P40318 YAR028WYAR028W 705 nt13.98□□□□□ -0.17
SSM4P40318 BIO5YNR056C 1686 nt13.95□□□□□ -0.18
SSM4P40318 IRC24YIR036C 792 nt13.95□□□□□ -0.18
SSM4P40318 FIT3YOR383C 615 nt13.92□□□□□ -0.18
SSM4P40318 RIB3YDR487C 627 nt13.9□□□□□ -0.18
SSM4P40318 SAM1YLR180W 1149 nt13.9□□□□□ -0.18
SSM4P40318 NVJ2YPR091C 2313 nt13.85□□□□□ -0.19
SSM4P40318 UGA4YDL210W 1716 nt13.84□□□□□ -0.19
SSM4P40318 ALP1YNL270C 1722 nt13.84□□□□□ -0.19
SSM4P40318 HIF1YLL022C 1158 nt13.84□□□□□ -0.19
SSM4P40318 RAD51YER095W 1203 nt13.83□□□□□ -0.2
SSM4P40318 YPL222C-AYPL222C-A 246 nt13.82□□□□□ -0.2
SSM4P40318 LOT5YKL183W 921 nt13.81□□□□□ -0.2
SSM4P40318 SED1YDR077W 1017 nt13.8□□□□□ -0.2
SSM4P40318 YPL251WYPL251W 303 nt13.8□□□□□ -0.2
SSM4P40318 YBL086CYBL086C 1401 nt13.78□□□□□ -0.2
SSM4P40318 ALD4YOR374W 1560 nt13.77□□□□□ -0.2
SSM4P40318 SAM35YHR083W 990 nt13.77□□□□□ -0.21
SSM4P40318 APT2YDR441C 546 nt13.76□□□□□ -0.21
SSM4P40318 GND1YHR183W 1470 nt13.74□□□□□ -0.21
SSM4P40318 LIP1YMR298W 453 nt13.74□□□□□ -0.21
SSM4P40318 DBP1YPL119C 1854 nt13.74□□□□□ -0.21
SSM4P40318 SMM1YNR015W 1155 nt13.73□□□□□ -0.21
SSM4P40318 HXT1YHR094C 1713 nt13.71□□□□□ -0.21
SSM4P40318 ALG12YNR030W 1656 nt13.69□□□□□ -0.22
SSM4P40318 ADH1YOL086C 1047 nt13.68□□□□□ -0.22
SSM4P40318 FCY21YER060W 1587 nt13.68□□□□□ -0.22
SSM4P40318 PRY1YJL079C 900 nt13.67□□□□□ -0.22
SSM4P40318 YMR103CYMR103C 363 nt13.66□□□□□ -0.22
SSM4P40318 MEP3YPR138C 1470 nt13.66□□□□□ -0.22
SSM4P40318 YNR029CYNR029C 1290 nt13.65□□□□□ -0.22
SSM4P40318 BRR1YPR057W 1026 nt13.64□□□□□ -0.23
SSM4P40318 RIB2YOL066C 1776 nt13.62□□□□□ -0.23
SSM4P40318 YJL055WYJL055W 738 nt13.62□□□□□ -0.23
SSM4P40318 TOA2YKL058W 369 nt13.62□□□□□ -0.23
SSM4P40318 YJL195CYJL195C 702 nt13.6□□□□□ -0.23
SSM4P40318 SHY1YGR112W 1170 nt13.59□□□□□ -0.23
SSM4P40318 GND2YGR256W 1479 nt13.58□□□□□ -0.24
SSM4P40318 YPI1YFR003C 468 nt13.58□□□□□ -0.24
SSM4P40318 Q0182Q0182 405 nt13.58□□□□□ -0.24
SSM4P40318 YLR349WYLR349W 507 nt13.58□□□□□ -0.24
SSM4P40318 LSB3YFR024C-A 1380 nt13.57□□□□□ -0.24
SSM4P40318 LEU9YOR108W 1815 nt13.56□□□□□ -0.24
SSM4P40318 PBP1YGR178C 2169 nt13.54□□□□□ -0.24
SSM4P40318 UFO1YML088W 2007 nt13.54□□□□□ -0.24
SSM4P40318 STE4YOR212W 1272 nt13.54□□□□□ -0.24
SSM4P40318 FUN14YAL008W 597 nt13.52□□□□□ -0.25
SSM4P40318 NAR1YNL240C 1476 nt13.5□□□□□ -0.25
SSM4P40318 CSM1YCR086W 573 nt13.49□□□□□ -0.25
SSM4P40318 SSN3YPL042C 1668 nt13.47□□□□□ -0.25
SSM4P40318 VRG4YGL225W 1014 nt13.46□□□□□ -0.25
SSM4P40318 GPN2YOR262W 1044 nt13.46□□□□□ -0.25
SSM4P40318 BNI5YNL166C 1347 nt13.45□□□□□ -0.26
SSM4P40318 TRT2tT(CGU)K 72 nt13.45□□□□□ -0.26
SSM4P40318 HXT12YIL170W 1374 nt13.44□□□□□ -0.26
SSM4P40318 ADH7YCR105W 1086 nt13.42□□□□□ -0.26
SSM4P40318 SAM3YPL274W 1764 nt13.42□□□□□ -0.26
SSM4P40318 YJL067WYJL067W 351 nt13.39□□□□□ -0.27
SSM4P40318 OYE3YPL171C 1203 nt13.39□□□□□ -0.27
SSM4P40318 MCH5YOR306C 1566 nt13.38□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms