Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 SAM1YLR180W 1149 nt8.69□□□□□ -1.02
CDC39P25655 YMR226CYMR226C 804 nt8.69□□□□□ -1.02
CDC39P25655 YNR029CYNR029C 1290 nt8.69□□□□□ -1.02
CDC39P25655 PRM5YIL117C 957 nt8.68□□□□□ -1.02
CDC39P25655 PLB1YMR008C 1995 nt8.67□□□□□ -1.02
CDC39P25655 YLR349WYLR349W 507 nt8.67□□□□□ -1.02
CDC39P25655 YSR3YKR053C 1215 nt8.66□□□□□ -1.02
CDC39P25655 NRT1YOR071C 1797 nt8.65□□□□□ -1.02
CDC39P25655 RPL4BYDR012W 1089 nt8.65□□□□□ -1.02
CDC39P25655 RPM1RPM1 483 nt8.65□□□□□ -1.02
CDC39P25655 RPL4AYBR031W 1089 nt8.65□□□□□ -1.02
CDC39P25655 BIO5YNR056C 1686 nt8.65□□□□□ -1.02
CDC39P25655 BMT6YLR063W 1098 nt8.65□□□□□ -1.03
CDC39P25655 TIR3YIL011W 810 nt8.64□□□□□ -1.03
CDC39P25655 ARP6YLR085C 1317 nt8.64□□□□□ -1.03
CDC39P25655 ADH7YCR105W 1086 nt8.63□□□□□ -1.03
CDC39P25655 SDH5YOL071W 489 nt8.63□□□□□ -1.03
CDC39P25655 YLR111WYLR111W 333 nt8.62□□□□□ -1.03
CDC39P25655 MSB4YOL112W 1479 nt8.61□□□□□ -1.03
CDC39P25655 LSC2YGR244C 1284 nt8.59□□□□□ -1.03
CDC39P25655 MRP20YDR405W 792 nt8.59□□□□□ -1.03
CDC39P25655 ADH1YOL086C 1047 nt8.59□□□□□ -1.03
CDC39P25655 IRC24YIR036C 792 nt8.58□□□□□ -1.04
CDC39P25655 SHH4YLR164W 507 nt8.58□□□□□ -1.04
CDC39P25655 YLR279WYLR279W 390 nt8.57□□□□□ -1.04
CDC39P25655 GAP1YKR039W 1809 nt8.56□□□□□ -1.04
CDC39P25655 PRP4YPR178W 1398 nt8.56□□□□□ -1.04
CDC39P25655 TSC10YBR265W 963 nt8.56□□□□□ -1.04
CDC39P25655 FUN14YAL008W 597 nt8.55□□□□□ -1.04
CDC39P25655 TOM6YOR045W 186 nt8.55□□□□□ -1.04
CDC39P25655 UTR1YJR049C 1593 nt8.55□□□□□ -1.04
CDC39P25655 MCH5YOR306C 1566 nt8.55□□□□□ -1.04
CDC39P25655 YGR012WYGR012W 1182 nt8.54□□□□□ -1.04
CDC39P25655 CLB6YGR109C 1143 nt8.54□□□□□ -1.04
CDC39P25655 STE4YOR212W 1272 nt8.54□□□□□ -1.04
CDC39P25655 PAU15YIR041W 375 nt8.54□□□□□ -1.04
CDC39P25655 PBP1YGR178C 2169 nt8.54□□□□□ -1.04
CDC39P25655 ALG12YNR030W 1656 nt8.53□□□□□ -1.04
CDC39P25655 DIF1YLR437C 402 nt8.51□□□□□ -1.05
CDC39P25655 NAR1YNL240C 1476 nt8.51□□□□□ -1.05
CDC39P25655 TIF6YPR016C 738 nt8.5□□□□□ -1.05
CDC39P25655 PRO1YDR300C 1287 nt8.49□□□□□ -1.05
CDC39P25655 POM34YLR018C 900 nt8.48□□□□□ -1.05
CDC39P25655 AAC1YMR056C 930 nt8.47□□□□□ -1.05
CDC39P25655 HIP1YGR191W 1812 nt8.46□□□□□ -1.05
CDC39P25655 RIB3YDR487C 627 nt8.46□□□□□ -1.06
CDC39P25655 ATG15YCR068W 1563 nt8.44□□□□□ -1.06
CDC39P25655 UTH1YKR042W 1098 nt8.44□□□□□ -1.06
CDC39P25655 PEX2YJL210W 816 nt8.43□□□□□ -1.06
CDC39P25655 ZTA1YBR046C 1005 nt8.42□□□□□ -1.06
CDC39P25655 DBP1YPL119C 1854 nt8.41□□□□□ -1.06
CDC39P25655 GND1YHR183W 1470 nt8.41□□□□□ -1.06
CDC39P25655 YML089CYML089C 369 nt8.4□□□□□ -1.06
CDC39P25655 HIF1YLL022C 1158 nt8.38□□□□□ -1.07
CDC39P25655 YPL222C-AYPL222C-A 246 nt8.38□□□□□ -1.07
CDC39P25655 YAT1YAR035W 2064 nt8.37□□□□□ -1.07
CDC39P25655 YPI1YFR003C 468 nt8.35□□□□□ -1.07
CDC39P25655 ESS1YJR017C 513 nt8.34□□□□□ -1.07
CDC39P25655 MET28YIR017C 564 nt8.33□□□□□ -1.08
CDC39P25655 AKR2YOR034C 2250 nt8.33□□□□□ -1.08
CDC39P25655 ALD4YOR374W 1560 nt8.33□□□□□ -1.08
CDC39P25655 LOT5YKL183W 921 nt8.32□□□□□ -1.08
CDC39P25655 SEN2YLR105C 1134 nt8.32□□□□□ -1.08
CDC39P25655 YBL086CYBL086C 1401 nt8.31□□□□□ -1.08
CDC39P25655 SAM35YHR083W 990 nt8.3□□□□□ -1.08
CDC39P25655 YJL195CYJL195C 702 nt8.3□□□□□ -1.08
CDC39P25655 UGA4YDL210W 1716 nt8.29□□□□□ -1.08
CDC39P25655 GPN2YOR262W 1044 nt8.29□□□□□ -1.08
CDC39P25655 tS(GCU)LtS(GCU)L 80 nt8.27□□□□□ -1.08
CDC39P25655 FIT3YOR383C 615 nt8.27□□□□□ -1.08
CDC39P25655 MTG2YHR168W 1557 nt8.27□□□□□ -1.09
CDC39P25655 YAR028WYAR028W 705 nt8.27□□□□□ -1.09
CDC39P25655 FCY21YER060W 1587 nt8.26□□□□□ -1.09
CDC39P25655 HSL7YBR133C 2484 nt8.26□□□□□ -1.09
CDC39P25655 MEP3YPR138C 1470 nt8.26□□□□□ -1.09
CDC39P25655 APT2YDR441C 546 nt8.25□□□□□ -1.09
CDC39P25655 LIP1YMR298W 453 nt8.25□□□□□ -1.09
CDC39P25655 SED1YDR077W 1017 nt8.24□□□□□ -1.09
CDC39P25655 CPD1YGR247W 720 nt8.24□□□□□ -1.09
CDC39P25655 RIB2YOL066C 1776 nt8.24□□□□□ -1.09
CDC39P25655 RDN25-1RDN25-1 3396 nt8.23□□□□□ -1.09
CDC39P25655 RDN25-2RDN25-2 3396 nt8.23□□□□□ -1.09
CDC39P25655 SMM1YNR015W 1155 nt8.23□□□□□ -1.09
CDC39P25655 ALP1YNL270C 1722 nt8.23□□□□□ -1.09
CDC39P25655 HXT12YIL170W 1374 nt8.23□□□□□ -1.09
CDC39P25655 HXT1YHR094C 1713 nt8.22□□□□□ -1.09
CDC39P25655 YEL008WYEL008W 381 nt8.21□□□□□ -1.09
CDC39P25655 PUP1YOR157C 786 nt8.21□□□□□ -1.1
CDC39P25655 YJL225CYJL225C 5277 nt8.2□□□□□ -1.1
CDC39P25655 YJL067WYJL067W 351 nt8.19□□□□□ -1.1
CDC39P25655 YER190C-AYER190C-A 576 nt8.17□□□□□ -1.1
CDC39P25655 YGR296C-AYGR296C-A 576 nt8.17□□□□□ -1.1
CDC39P25655 YML133W-AYML133W-A 576 nt8.17□□□□□ -1.1
CDC39P25655 YNL339W-AYNL339W-A 576 nt8.17□□□□□ -1.1
CDC39P25655 YPL283W-AYPL283W-A 576 nt8.17□□□□□ -1.1
CDC39P25655 SHY1YGR112W 1170 nt8.15□□□□□ -1.1
CDC39P25655 TOA2YKL058W 369 nt8.14□□□□□ -1.11
CDC39P25655 LSB5YCL034W 1065 nt8.14□□□□□ -1.11
CDC39P25655 CYT2YKL087C 675 nt8.13□□□□□ -1.11
CDC39P25655 CCT5YJR064W 1689 nt8.12□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms