Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 UTH1YKR042W 1098 nt15.62■□□□□ 0.09
TY1B-PR2P0C2J0 GOR1YNL274C 1053 nt15.61■□□□□ 0.09
TY1B-PR2P0C2J0 YCR102CYCR102C 1107 nt15.6■□□□□ 0.09
TY1B-PR2P0C2J0 CLB6YGR109C 1143 nt15.6■□□□□ 0.09
TY1B-PR2P0C2J0 GUT2YIL155C 1950 nt15.57■□□□□ 0.08
TY1B-PR2P0C2J0 CPD1YGR247W 720 nt15.55■□□□□ 0.08
TY1B-PR2P0C2J0 AAC1YMR056C 930 nt15.54■□□□□ 0.08
TY1B-PR2P0C2J0 ESS1YJR017C 513 nt15.53■□□□□ 0.08
TY1B-PR2P0C2J0 LOT5YKL183W 921 nt15.52■□□□□ 0.08
TY1B-PR2P0C2J0 SEN2YLR105C 1134 nt15.52■□□□□ 0.07
TY1B-PR2P0C2J0 PIB2YGL023C 1908 nt15.51■□□□□ 0.07
TY1B-PR2P0C2J0 TIR3YIL011W 810 nt15.5■□□□□ 0.07
TY1B-PR2P0C2J0 HIP1YGR191W 1812 nt15.5■□□□□ 0.07
TY1B-PR2P0C2J0 PUP1YOR157C 786 nt15.49■□□□□ 0.07
TY1B-PR2P0C2J0 RIB3YDR487C 627 nt15.46■□□□□ 0.07
TY1B-PR2P0C2J0 CCA1YER168C 1641 nt15.45■□□□□ 0.06
TY1B-PR2P0C2J0 RAX1YOR301W 1308 nt15.43■□□□□ 0.06
TY1B-PR2P0C2J0 AQY2YLL052C 450 nt15.41■□□□□ 0.06
TY1B-PR2P0C2J0 YEL008WYEL008W 381 nt15.4■□□□□ 0.06
TY1B-PR2P0C2J0 ZTA1YBR046C 1005 nt15.39■□□□□ 0.05
TY1B-PR2P0C2J0 YPI1YFR003C 468 nt15.38■□□□□ 0.05
TY1B-PR2P0C2J0 NBP35YGL091C 987 nt15.38■□□□□ 0.05
TY1B-PR2P0C2J0 TIF6YPR016C 738 nt15.38■□□□□ 0.05
TY1B-PR2P0C2J0 YFL054CYFL054C 1941 nt15.37■□□□□ 0.05
TY1B-PR2P0C2J0 YPL222C-AYPL222C-A 246 nt15.35■□□□□ 0.05
TY1B-PR2P0C2J0 ATG15YCR068W 1563 nt15.35■□□□□ 0.05
TY1B-PR2P0C2J0 PTK1YKL198C 1989 nt15.32■□□□□ 0.04
TY1B-PR2P0C2J0 POM34YLR018C 900 nt15.31■□□□□ 0.04
TY1B-PR2P0C2J0 APT2YDR441C 546 nt15.29■□□□□ 0.04
TY1B-PR2P0C2J0 RDN18-1RDN18-1 1800 nt15.25■□□□□ 0.03
TY1B-PR2P0C2J0 RDN18-2RDN18-2 1800 nt15.25■□□□□ 0.03
TY1B-PR2P0C2J0 RIB2YOL066C 1776 nt15.25■□□□□ 0.03
TY1B-PR2P0C2J0 GND1YHR183W 1470 nt15.24■□□□□ 0.03
TY1B-PR2P0C2J0 PRO1YDR300C 1287 nt15.24■□□□□ 0.03
TY1B-PR2P0C2J0 NAP1YKR048C 1254 nt15.24■□□□□ 0.03
TY1B-PR2P0C2J0 PGC1YPL206C 966 nt15.21■□□□□ 0.03
TY1B-PR2P0C2J0 MET28YIR017C 564 nt15.2■□□□□ 0.02
TY1B-PR2P0C2J0 AKR2YOR034C 2250 nt15.19■□□□□ 0.02
TY1B-PR2P0C2J0 PAU5YFL020C 369 nt15.19■□□□□ 0.02
TY1B-PR2P0C2J0 DUS1YML080W 1272 nt15.16■□□□□ 0.02
TY1B-PR2P0C2J0 YJR114WYJR114W 393 nt15.15■□□□□ 0.02
TY1B-PR2P0C2J0 LSB3YFR024C-A 1380 nt15.15■□□□□ 0.02
TY1B-PR2P0C2J0 YML089CYML089C 369 nt15.13■□□□□ 0.01
TY1B-PR2P0C2J0 SWE1YJL187C 2460 nt15.11■□□□□ 0.01
TY1B-PR2P0C2J0 ALD4YOR374W 1560 nt15.1■□□□□ 0.01
TY1B-PR2P0C2J0 SMM1YNR015W 1155 nt15.09■□□□□ 0.01
TY1B-PR2P0C2J0 YJL055WYJL055W 738 nt15.08■□□□□ 0.01
TY1B-PR2P0C2J0 YJL064WYJL064W 396 nt15.08■□□□□ 0.01
TY1B-PR2P0C2J0 SLG1YOR008C 1137 nt15.08■□□□□ 0.01
TY1B-PR2P0C2J0 FIT3YOR383C 615 nt15.08■□□□□ 0.01
TY1B-PR2P0C2J0 YBR232CYBR232C 360 nt15.05■□□□□ -0
TY1B-PR2P0C2J0 UGA4YDL210W 1716 nt15.04■□□□□ -0
TY1B-PR2P0C2J0 LSC2YGR244C 1284 nt15.03■□□□□ -0
TY1B-PR2P0C2J0 PAU19YMR325W 375 nt15.02□□□□□ -0.01
TY1B-PR2P0C2J0 PRY1YJL079C 900 nt15.01□□□□□ -0.01
TY1B-PR2P0C2J0 STR3YGL184C 1398 nt15.01□□□□□ -0.01
TY1B-PR2P0C2J0 TIP1YBR067C 633 nt15□□□□□ -0.01
TY1B-PR2P0C2J0 DIF1YLR437C 402 nt14.97□□□□□ -0.01
TY1B-PR2P0C2J0 YAR028WYAR028W 705 nt14.91□□□□□ -0.02
TY1B-PR2P0C2J0 GAP1YKR039W 1809 nt14.91□□□□□ -0.02
TY1B-PR2P0C2J0 YCL074WYCL074W 927 nt14.9□□□□□ -0.02
TY1B-PR2P0C2J0 ARP6YLR085C 1317 nt14.87□□□□□ -0.03
TY1B-PR2P0C2J0 HXT12YIL170W 1374 nt14.86□□□□□ -0.03
TY1B-PR2P0C2J0 FCY21YER060W 1587 nt14.86□□□□□ -0.03
TY1B-PR2P0C2J0 THI72YOR192C 1800 nt14.85□□□□□ -0.03
TY1B-PR2P0C2J0 VRG4YGL225W 1014 nt14.84□□□□□ -0.03
TY1B-PR2P0C2J0 ERG6YML008C 1152 nt14.83□□□□□ -0.04
TY1B-PR2P0C2J0 TIM44YIL022W 1296 nt14.82□□□□□ -0.04
TY1B-PR2P0C2J0 PLB1YMR008C 1995 nt14.81□□□□□ -0.04
TY1B-PR2P0C2J0 MTG2YHR168W 1557 nt14.79□□□□□ -0.04
TY1B-PR2P0C2J0 RTN2YDL204W 1182 nt14.78□□□□□ -0.04
TY1B-PR2P0C2J0 CCT5YJR064W 1689 nt14.78□□□□□ -0.04
TY1B-PR2P0C2J0 HSP60YLR259C 1719 nt14.78□□□□□ -0.04
TY1B-PR2P0C2J0 ALP1YNL270C 1722 nt14.74□□□□□ -0.05
TY1B-PR2P0C2J0 UTR1YJR049C 1593 nt14.73□□□□□ -0.05
TY1B-PR2P0C2J0 YJL118WYJL118W 660 nt14.7□□□□□ -0.06
TY1B-PR2P0C2J0 STP3YLR375W 1032 nt14.7□□□□□ -0.06
TY1B-PR2P0C2J0 MEP3YPR138C 1470 nt14.68□□□□□ -0.06
TY1B-PR2P0C2J0 SNZ1YMR096W 894 nt14.62□□□□□ -0.07
TY1B-PR2P0C2J0 YER190C-AYER190C-A 576 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 YGR296C-AYGR296C-A 576 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 YML133W-AYML133W-A 576 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 YNL339W-AYNL339W-A 576 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 YPL283W-AYPL283W-A 576 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 POP2YNR052C 1302 nt14.61□□□□□ -0.07
TY1B-PR2P0C2J0 RIB1YBL033C 1038 nt14.6□□□□□ -0.07
TY1B-PR2P0C2J0 SED1YDR077W 1017 nt14.59□□□□□ -0.07
TY1B-PR2P0C2J0 PRM5YIL117C 957 nt14.55□□□□□ -0.08
TY1B-PR2P0C2J0 YMR262WYMR262W 942 nt14.54□□□□□ -0.08
TY1B-PR2P0C2J0 GAL3YDR009W 1563 nt14.54□□□□□ -0.08
TY1B-PR2P0C2J0 SOD2YHR008C 702 nt14.53□□□□□ -0.08
TY1B-PR2P0C2J0 APS2YJR058C 444 nt14.52□□□□□ -0.09
TY1B-PR2P0C2J0 YPL251WYPL251W 303 nt14.52□□□□□ -0.09
TY1B-PR2P0C2J0 LSB5YCL034W 1065 nt14.51□□□□□ -0.09
TY1B-PR2P0C2J0 YER152W-AYER152W-A 567 nt14.5□□□□□ -0.09
TY1B-PR2P0C2J0 TAF13YML098W 504 nt14.5□□□□□ -0.09
TY1B-PR2P0C2J0 FUR4YBR021W 1902 nt14.48□□□□□ -0.09
TY1B-PR2P0C2J0 QDR2YIL121W 1629 nt14.47□□□□□ -0.09
TY1B-PR2P0C2J0 CSM1YCR086W 573 nt14.43□□□□□ -0.1
TY1B-PR2P0C2J0 YIA6YIL006W 1122 nt14.43□□□□□ -0.1
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms