Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNF7-202ENST00000393000 805 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC1A1P43005 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 RN7SKP262-201ENST00000411018 283 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC1A1P43005 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC1A1P43005 AL929472.4-201ENST00000447422 691 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC1A1P43005 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC1A1P43005 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC1A1P43005 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 NAV1-210ENST00000593583 726 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.77□□□□□ -0.37
SLC1A1P43005 CASP16P-204ENST00000635032 809 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 IGSF11-204ENST00000441144 1952 ntTSL 2 BASIC12.77□□□□□ -0.37
SLC1A1P43005 TLR8-AS1-201ENST00000451564 1349 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC1A1P43005 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SLC1A1P43005 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 AP002008.2-201ENST00000635926 4870 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SLC1A1P43005 CDK13-206ENST00000611390 2222 ntTSL 5 BASIC12.77□□□□□ -0.37
SLC1A1P43005 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 AC018737.2-201ENST00000624478 1512 ntBASIC12.77□□□□□ -0.37
SLC1A1P43005 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SLC1A1P43005 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC12.77□□□□□ -0.37
SLC1A1P43005 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SLC1A1P43005 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC009927.1-201ENST00000510501 1779 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 FDPSP7-201ENST00000429043 1054 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC12.76□□□□□ -0.37
SLC1A1P43005 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 KRT128P-201ENST00000550729 663 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.76□□□□□ -0.37
SLC1A1P43005 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC008537.1-201ENST00000601627 575 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SLC1A1P43005 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AL512324.3-201ENST00000619383 882 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 CCNB3P1-201ENST00000504855 1431 ntBASIC12.76□□□□□ -0.37
SLC1A1P43005 ENO4-202ENST00000369207 1484 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 ARHGAP25-207ENST00000467265 2247 ntTSL 2 BASIC12.76□□□□□ -0.37
SLC1A1P43005 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SLC1A1P43005 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SLC1A1P43005 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 CAMK2B-201ENST00000258682 1652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SLC1A1P43005 CD5-201ENST00000347785 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 OPRM1-204ENST00000360422 1737 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 MAGEB17-201ENST00000400003 1379 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SLC1A1P43005 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC1A1P43005 EDAR-203ENST00000409271 4323 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC1A1P43005 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms