Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC090821.1-201ENST00000517380 1041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 PSME1-210ENST00000561435 945 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
MTHFRP42898 AP005121.2-201ENST00000583306 1101 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC104365.2-201ENST00000586383 740 ntTSL 3 BASIC12.78□□□□□ -0.36
MTHFRP42898 HKR1-206ENST00000586897 510 ntTSL 4 BASIC12.78□□□□□ -0.36
MTHFRP42898 CLPP-204ENST00000596149 745 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC138393.1-201ENST00000622033 624 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 TNNT3-217ENST00000641225 877 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
MTHFRP42898 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 TUBA1A-207ENST00000550767 1384 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MTHFRP42898 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.78□□□□□ -0.36
MTHFRP42898 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 FLJ30679-201ENST00000624773 1980 ntBASIC12.78□□□□□ -0.36
MTHFRP42898 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.78□□□□□ -0.36
MTHFRP42898 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MTHFRP42898 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 AC134407.3-201ENST00000624035 2139 ntBASIC12.77□□□□□ -0.36
MTHFRP42898 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
MTHFRP42898 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.77□□□□□ -0.36
MTHFRP42898 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.77□□□□□ -0.36
MTHFRP42898 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.77□□□□□ -0.36
MTHFRP42898 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
MTHFRP42898 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
MTHFRP42898 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MTHFRP42898 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 COX17-201ENST00000261070 684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
MTHFRP42898 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC12.77□□□□□ -0.37
MTHFRP42898 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 GNAS-209ENST00000371081 730 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
MTHFRP42898 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 GUSBP1-201ENST00000449061 758 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC12.77□□□□□ -0.37
MTHFRP42898 AC068298.1-201ENST00000465165 161 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 GM2AP1-201ENST00000491450 521 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 AC020917.1-201ENST00000494084 893 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC12.77□□□□□ -0.37
MTHFRP42898 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC12.77□□□□□ -0.37
MTHFRP42898 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC12.77□□□□□ -0.37
MTHFRP42898 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC12.77□□□□□ -0.37
MTHFRP42898 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.77□□□□□ -0.37
MTHFRP42898 MAP3K14-AS1-207ENST00000588698 460 ntTSL 4 BASIC12.77□□□□□ -0.37
MTHFRP42898 LINC01198-206ENST00000595532 1125 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC12.77□□□□□ -0.37
MTHFRP42898 EMG1-206ENST00000607161 1087 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 AC024580.2-201ENST00000623363 231 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 AC092723.2-201ENST00000624955 793 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 LINC00680-206ENST00000635948 181 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 FAM90A17P-201ENST00000533716 1957 ntBASIC12.77□□□□□ -0.37
MTHFRP42898 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
MTHFRP42898 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 AL358075.4-201ENST00000540385 1553 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MTHFRP42898 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MTHFRP42898 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms