Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
MTHFRP42898 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC12.87□□□□□ -0.35
MTHFRP42898 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 LYPLA1P2-201ENST00000513113 691 ntBASIC12.87□□□□□ -0.35
MTHFRP42898 PSCA-204ENST00000513264 551 ntAPPRIS ALT2 TSL 4 BASIC12.87□□□□□ -0.35
MTHFRP42898 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 AC133919.3-201ENST00000621407 1804 ntBASIC12.87□□□□□ -0.35
MTHFRP42898 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 USP4-204ENST00000416417 1536 ntTSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 KRT8P46-201ENST00000512037 1426 ntBASIC12.87□□□□□ -0.35
MTHFRP42898 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
MTHFRP42898 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 AC120114.4-201ENST00000623731 2194 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC12.86□□□□□ -0.35
MTHFRP42898 AL049542.1-201ENST00000430231 278 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 GPAA1P1-201ENST00000453019 931 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 AP000695.2-202ENST00000454980 649 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 PRAMEF35P-201ENST00000458709 891 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 JPT1-208ENST00000481647 576 ntTSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 HNRNPA3P13-201ENST00000512222 1122 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
MTHFRP42898 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC12.86□□□□□ -0.35
MTHFRP42898 MT3-206ENST00000570176 579 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC12.86□□□□□ -0.35
MTHFRP42898 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 AC008750.6-201ENST00000598746 322 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 AC079882.1-201ENST00000609433 375 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 AL513485.1-201ENST00000617915 845 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 PIGA-209ENST00000634582 965 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 C17orf75-202ENST00000577809 1642 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 AC073263.2-201ENST00000624835 1863 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 TRIM80P-201ENST00000455685 2848 ntBASIC12.86□□□□□ -0.35
MTHFRP42898 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.86□□□□□ -0.35
MTHFRP42898 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MTHFRP42898 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MTHFRP42898 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 MAPK10-262ENST00000641051 5738 ntBASIC12.85□□□□□ -0.35
MTHFRP42898 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
MTHFRP42898 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC12.85□□□□□ -0.35
MTHFRP42898 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
MTHFRP42898 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
MTHFRP42898 TYRL-201ENST00000243152 441 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms