Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 BTBD10-201ENST00000278174 2504 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
TRAF6Q9Y4K3 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CD209-201ENST00000204801 1083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CD209-202ENST00000315591 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 RN7SKP90-201ENST00000363013 335 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 MIR1301-201ENST00000408518 82 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AP001331.1-201ENST00000413008 1015 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC126471.1-201ENST00000550676 362 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 MIR3183-201ENST00000578566 84 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC010632.2-201ENST00000588369 1224 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC136475.7-201ENST00000602949 592 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC091941.1-201ENST00000623003 576 ntBASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 IRF5-203ENST00000402030 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 NCAM1-230ENST00000621850 2787 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAF6Q9Y4K3 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 CPNE8-203ENST00000538596 2875 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC243772.2-201ENST00000428289 3543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 ZNF185-210ENST00000454925 3191 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 HDGF-202ENST00000368206 960 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 MIR874-201ENST00000401190 78 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 HNRNPA1P19-201ENST00000405292 370 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 YBX1P3-201ENST00000468366 909 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 RN7SL396P-201ENST00000471086 295 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC013403.2-201ENST00000607659 480 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC009084.3-201ENST00000623356 437 ntBASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAF6Q9Y4K3 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms