Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 IFNL3P1-201ENST00000595082 501 ntBASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 AC116036.2-201ENST00000607592 462 ntBASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 DNAJB14-212ENST00000610281 339 ntTSL 5 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 AC018645.3-201ENST00000628855 2646 ntBASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PRICKLE4Q2TBC4 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 WDR92-203ENST00000409164 1517 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 AL008638.4-201ENST00000624792 1315 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 RPL36AP29-201ENST00000415878 321 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 ACTG1P10-201ENST00000428275 1082 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 RN7SL43P-201ENST00000463926 291 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 RN7SL483P-201ENST00000478417 285 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 SP3P-201ENST00000414049 2065 ntBASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
PRICKLE4Q2TBC4 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 AL021877.1-201ENST00000457251 2194 ntBASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
PRICKLE4Q2TBC4 AL035448.1-201ENST00000439529 1831 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 LINC01511-202ENST00000504989 1616 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 AL354674.1-201ENST00000585222 1780 ntBASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
PRICKLE4Q2TBC4 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms