Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 RN7SL217P-201ENST00000584520 286 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC12.89□□□□□ -0.35
MTHFRP42898 LINC00339-213ENST00000642137 222 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.89□□□□□ -0.35
MTHFRP42898 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 CTAGE13P-201ENST00000416709 2446 ntBASIC12.89□□□□□ -0.35
MTHFRP42898 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MTHFRP42898 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.89□□□□□ -0.35
MTHFRP42898 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 AC095350.1-201ENST00000443685 1711 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 AC126564.1-201ENST00000623628 2013 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MTHFRP42898 UQCRFS1P2-201ENST00000426701 722 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 AL160270.1-201ENST00000439960 631 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 HSD3BP2-201ENST00000457615 1118 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC12.88□□□□□ -0.35
MTHFRP42898 AC015743.1-201ENST00000524123 795 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 AC087441.1-201ENST00000531069 301 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC12.88□□□□□ -0.35
MTHFRP42898 AC069366.2-201ENST00000583643 430 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC12.88□□□□□ -0.35
MTHFRP42898 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC12.88□□□□□ -0.35
MTHFRP42898 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.88□□□□□ -0.35
MTHFRP42898 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.88□□□□□ -0.35
MTHFRP42898 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 FAM95B1-212ENST00000592873 4692 ntBASIC12.88□□□□□ -0.35
MTHFRP42898 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MTHFRP42898 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MTHFRP42898 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 TIRAP-202ENST00000392679 2195 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC12.87□□□□□ -0.35
MTHFRP42898 AL845472.1-202ENST00000624675 4080 ntBASIC12.87□□□□□ -0.35
MTHFRP42898 BHLHB9P1-201ENST00000553845 1651 ntBASIC12.87□□□□□ -0.35
MTHFRP42898 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
MTHFRP42898 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MTHFRP42898 AC106872.1-201ENST00000512492 1360 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms