Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC11.26□□□□□ -0.61
P04436 HMGA1P2-201ENST00000430198 324 ntBASIC11.26□□□□□ -0.61
P04436 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC11.26□□□□□ -0.61
P04436 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC11.26□□□□□ -0.61
P04436 ZNHIT1P1-201ENST00000523947 444 ntBASIC11.26□□□□□ -0.61
P04436 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 C12orf80-202ENST00000551894 1257 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TPST2P1-201ENST00000564073 1102 ntBASIC11.26□□□□□ -0.61
P04436 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC11.26□□□□□ -0.61
P04436 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC11.26□□□□□ -0.61
P04436 SH3GL1P2-201ENST00000582245 1082 ntBASIC11.26□□□□□ -0.61
P04436 ZNF667-AS1-203ENST00000586822 468 ntTSL 2 BASIC11.26□□□□□ -0.61
P04436 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
P04436 AC008750.6-201ENST00000598746 322 ntBASIC11.26□□□□□ -0.61
P04436 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC11.26□□□□□ -0.61
P04436 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC11.26□□□□□ -0.61
P04436 AC137936.2-201ENST00000636329 620 ntBASIC11.26□□□□□ -0.61
P04436 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
P04436 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P04436 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P04436 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
P04436 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC11.26□□□□□ -0.61
P04436 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 AL662907.1-201ENST00000622988 1360 ntBASIC11.26□□□□□ -0.61
P04436 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
P04436 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.26□□□□□ -0.61
P04436 POM121L1P-202ENST00000605258 1835 ntBASIC11.25□□□□□ -0.61
P04436 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 CSPG4P13-202ENST00000567704 4801 ntBASIC11.25□□□□□ -0.61
P04436 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.25□□□□□ -0.61
P04436 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.25□□□□□ -0.61
P04436 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
P04436 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC11.25□□□□□ -0.61
P04436 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
P04436 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P04436 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
P04436 POLR3DP1-201ENST00000398689 1176 ntBASIC11.25□□□□□ -0.61
P04436 U3.41-201ENST00000408711 219 ntBASIC11.25□□□□□ -0.61
P04436 MED20-204ENST00000409312 932 ntTSL 2 BASIC11.25□□□□□ -0.61
P04436 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC11.25□□□□□ -0.61
P04436 AL049792.1-201ENST00000424708 1262 ntBASIC11.25□□□□□ -0.61
P04436 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC11.25□□□□□ -0.61
P04436 DDTP1-201ENST00000443589 383 ntBASIC11.25□□□□□ -0.61
P04436 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC11.25□□□□□ -0.61
P04436 RN7SL304P-201ENST00000488028 301 ntBASIC11.25□□□□□ -0.61
P04436 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
P04436 SAA2-204ENST00000528349 948 ntTSL 2 BASIC11.25□□□□□ -0.61
P04436 AC142086.5-202ENST00000562500 217 ntBASIC11.25□□□□□ -0.61
P04436 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC11.25□□□□□ -0.61
P04436 MIR378I-201ENST00000582688 76 ntBASIC11.25□□□□□ -0.61
P04436 AC084018.1-201ENST00000609067 572 ntTSL 4 BASIC11.25□□□□□ -0.61
P04436 AL158032.2-201ENST00000616818 195 ntBASIC11.25□□□□□ -0.61
P04436 AC138393.1-201ENST00000622033 624 ntTSL 5 BASIC11.25□□□□□ -0.61
P04436 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC11.25□□□□□ -0.61
P04436 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
P04436 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P04436 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P04436 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
P04436 CAPN10-AS1-201ENST00000567819 4000 ntBASIC11.25□□□□□ -0.61
P04436 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P04436 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P04436 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC11.25□□□□□ -0.61
P04436 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms