Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SCN2BO60939 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 NCALD-202ENST00000311028 3655 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 FAM71F1-201ENST00000315184 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 RN7SKP20-201ENST00000362752 313 ntBASIC11.73□□□□□ -0.53
SCN2BO60939 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 MIR566-201ENST00000385187 94 ntBASIC11.73□□□□□ -0.53
SCN2BO60939 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 HOPX-205ENST00000420433 1543 ntTSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 PPIEL-201ENST00000427240 813 ntBASIC11.73□□□□□ -0.53
SCN2BO60939 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 AC104066.1-201ENST00000512377 751 ntBASIC11.73□□□□□ -0.53
SCN2BO60939 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC11.73□□□□□ -0.53
SCN2BO60939 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 PLA2G4C-219ENST00000599111 2458 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SCN2BO60939 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 AC020904.3-201ENST00000624199 442 ntBASIC11.73□□□□□ -0.53
SCN2BO60939 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SCN2BO60939 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SCN2BO60939 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SCN2BO60939 CETN3-201ENST00000283122 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC096637.2-202ENST00000421933 1846 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 WDR92-203ENST00000409164 1517 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 AC010201.2-201ENST00000605595 1495 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 LINC02211-203ENST00000642022 2816 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SCN2BO60939 AL356583.1-201ENST00000398739 1371 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 CD209-201ENST00000204801 1083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 CD209-202ENST00000315591 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 RN7SKP90-201ENST00000363013 335 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 AL357054.1-201ENST00000407035 1227 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 PRSS3-204ENST00000429677 786 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 AC079325.1-201ENST00000430386 857 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 RPSAP70-201ENST00000504462 864 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.72□□□□□ -0.53
SCN2BO60939 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 HNRNPA1P50-201ENST00000546565 928 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC11.72□□□□□ -0.53
SCN2BO60939 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SCN2BO60939 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC11.72□□□□□ -0.53
SCN2BO60939 PRR20FP-201ENST00000603320 180 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC11.72□□□□□ -0.53
SCN2BO60939 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms