Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01558Q9Y6Z2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 LTB4R2-202ENST00000528054 3092 ntBASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01558Q9Y6Z2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01558Q9Y6Z2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 AC090340.1-201ENST00000620778 4980 ntBASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01558Q9Y6Z2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms