Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 C11orf96-202ENST00000528572 1834 ntBASIC20.41■□□□□ 0.86
GPC6Q9Y625 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GPC6Q9Y625 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
GPC6Q9Y625 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GPC6Q9Y625 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GPC6Q9Y625 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.4■□□□□ 0.86
GPC6Q9Y625 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC6Q9Y625 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC6Q9Y625 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GPC6Q9Y625 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC6Q9Y625 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GPC6Q9Y625 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
GPC6Q9Y625 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.39■□□□□ 0.85
GPC6Q9Y625 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
GPC6Q9Y625 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GPC6Q9Y625 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.39■□□□□ 0.85
GPC6Q9Y625 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 AC131212.1-201ENST00000613771 668 ntBASIC20.38■□□□□ 0.85
GPC6Q9Y625 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GPC6Q9Y625 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GPC6Q9Y625 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC6Q9Y625 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
GPC6Q9Y625 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC6Q9Y625 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.37■□□□□ 0.85
GPC6Q9Y625 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.37■□□□□ 0.85
GPC6Q9Y625 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GPC6Q9Y625 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 AC004687.1-201ENST00000579003 1625 ntBASIC20.36■□□□□ 0.85
GPC6Q9Y625 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GPC6Q9Y625 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.36■□□□□ 0.85
GPC6Q9Y625 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC6Q9Y625 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC6Q9Y625 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC6Q9Y625 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GPC6Q9Y625 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
GPC6Q9Y625 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 AC073130.3-201ENST00000624389 2278 ntBASIC20.34■□□□□ 0.85
GPC6Q9Y625 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms