Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 AC006970.2-201ENST00000450065 779 ntBASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SNX11Q9Y5W9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 CROCCP5-201ENST00000436658 830 ntBASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNX11Q9Y5W9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNX11Q9Y5W9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.52■■□□□ 1.04
SNX11Q9Y5W9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNX11Q9Y5W9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.52■■□□□ 1.04
SNX11Q9Y5W9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNX11Q9Y5W9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 AC079140.4-201ENST00000507448 529 ntBASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 AC011767.1-201ENST00000617410 1153 ntBASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNX11Q9Y5W9 ESRRAP2-201ENST00000418437 1549 ntBASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 OXCT2P1-201ENST00000447263 1535 ntBASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 AL109923.1-201ENST00000618799 583 ntBASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNX11Q9Y5W9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 AL355802.2-201ENST00000402069 882 ntBASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNX11Q9Y5W9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 KRT18P11-201ENST00000435214 1283 ntBASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.48■■□□□ 1.03
SNX11Q9Y5W9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SNX11Q9Y5W9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms