Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PCDHGA11Q9Y5H2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 AL137060.1-201ENST00000618151 2648 ntBASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 AC131212.1-201ENST00000613771 668 ntBASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHGA11Q9Y5H2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 AL136116.3-201ENST00000402907 1138 ntBASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 AC011298.3-201ENST00000615796 283 ntBASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHGA11Q9Y5H2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHGA11Q9Y5H2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
PCDHGA11Q9Y5H2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 C11orf96-202ENST00000528572 1834 ntBASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 AC136469.2-201ENST00000623944 1028 ntBASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHGA11Q9Y5H2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA11Q9Y5H2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms