Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA4Q9Y5G9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 SLC47A1P1-202ENST00000449666 945 ntBASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 AC126544.1-201ENST00000580842 1059 ntBASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA4Q9Y5G9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA4Q9Y5G9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 AC092437.1-201ENST00000624794 1048 ntBASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA4Q9Y5G9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L2-201ENST00000561772 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L6-201ENST00000626483 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L1-201ENST00000627662 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L8-201ENST00000629013 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L3-201ENST00000630187 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L7-201ENST00000630678 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 DUX4L5-201ENST00000630834 1275 ntBASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDHGA4Q9Y5G9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 AC133637.1-201ENST00000624115 1537 ntBASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 TSPY26P-201ENST00000476365 1326 ntBASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA4Q9Y5G9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGA4Q9Y5G9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA4Q9Y5G9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms