Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC01529-204ENST00000636474 1715 ntBASIC20.45■□□□□ 0.86
AP4S1Q9Y587 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 AF131216.4-201ENST00000638924 1588 ntBASIC20.45■□□□□ 0.86
AP4S1Q9Y587 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.45■□□□□ 0.86
AP4S1Q9Y587 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 AC022616.5-201ENST00000518796 181 ntBASIC20.44■□□□□ 0.86
AP4S1Q9Y587 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP4S1Q9Y587 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP4S1Q9Y587 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4S1Q9Y587 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 RNF165-205ENST00000588679 2904 ntBASIC20.41■□□□□ 0.86
AP4S1Q9Y587 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4S1Q9Y587 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4S1Q9Y587 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.39■□□□□ 0.86
AP4S1Q9Y587 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 CA15P2-201ENST00000611168 834 ntBASIC20.39■□□□□ 0.85
AP4S1Q9Y587 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms