Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 AC006058.3-201ENST00000606217 1069 ntBASIC20.5■□□□□ 0.87
LHX6Q9UPM6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LHX6Q9UPM6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 AC211429.1-201ENST00000415277 523 ntBASIC20.48■□□□□ 0.87
LHX6Q9UPM6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 KRT18P21-201ENST00000515767 1272 ntBASIC20.48■□□□□ 0.87
LHX6Q9UPM6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LHX6Q9UPM6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.47■□□□□ 0.87
LHX6Q9UPM6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX6Q9UPM6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.46■□□□□ 0.87
LHX6Q9UPM6 AC128676.1-201ENST00000454392 318 ntBASIC20.46■□□□□ 0.87
LHX6Q9UPM6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX6Q9UPM6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX6Q9UPM6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX6Q9UPM6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 UBE2DNL-204ENST00000602536 740 ntBASIC20.43■□□□□ 0.86
LHX6Q9UPM6 LINC01023-201ENST00000606054 436 ntBASIC20.43■□□□□ 0.86
LHX6Q9UPM6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.43■□□□□ 0.86
LHX6Q9UPM6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms