Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 SUDS3P1-201ENST00000505831 966 ntBASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 IGHV3-19-201ENST00000521488 291 ntBASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 AF213884.3-201ENST00000563833 479 ntBASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 AL136967.2-201ENST00000623968 743 ntBASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHGC3Q9UN70 C11orf96-202ENST00000528572 1834 ntBASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PCDHGC3Q9UN70 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
PCDHGC3Q9UN70 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 RASA4CP-201ENST00000424092 1398 ntBASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 AC091305.1-201ENST00000479476 895 ntBASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGC3Q9UN70 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGC3Q9UN70 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC3Q9UN70 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC3Q9UN70 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC3Q9UN70 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC3Q9UN70 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGC3Q9UN70 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms