Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
DUX4Q9UBX2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
DUX4Q9UBX2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
DUX4Q9UBX2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.89■□□□□ 0.61
DUX4Q9UBX2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DUX4Q9UBX2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 AL137060.1-201ENST00000618151 2648 ntBASIC18.88■□□□□ 0.61
DUX4Q9UBX2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.88■□□□□ 0.61
DUX4Q9UBX2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 MIR3621-201ENST00000580529 85 ntBASIC18.87■□□□□ 0.61
DUX4Q9UBX2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.87■□□□□ 0.61
DUX4Q9UBX2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUX4Q9UBX2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 AL356740.2-201ENST00000601559 647 ntBASIC18.85■□□□□ 0.61
DUX4Q9UBX2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DUX4Q9UBX2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUX4Q9UBX2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms