Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 Z92544.1-202ENST00000571933 1220 ntBASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF2Q9P2I0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 LINC01960-201ENST00000563759 1884 ntBASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF2Q9P2I0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 AC239859.2-201ENST00000444165 318 ntBASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF2Q9P2I0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 TSPY9P-201ENST00000440215 945 ntBASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 TSPY11P-201ENST00000442607 1045 ntBASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 DUX4L4-201ENST00000566884 1269 ntBASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CPSF2Q9P2I0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 AF106564.1-201ENST00000607058 2553 ntBASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 AC009086.3-201ENST00000623486 1008 ntBASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF2Q9P2I0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 AC009102.2-201ENST00000606772 1639 ntBASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF2Q9P2I0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 AC009299.2-201ENST00000482477 511 ntBASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 AC010997.5-201ENST00000609182 354 ntBASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 AC004687.1-201ENST00000579003 1625 ntBASIC21.66■■□□□ 1.06
CPSF2Q9P2I0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF2Q9P2I0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms