Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 AC080038.3-201ENST00000623346 1952 ntBASIC18.39■□□□□ 0.53
COMMD9Q9P000 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COMMD9Q9P000 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COMMD9Q9P000 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD9Q9P000 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
COMMD9Q9P000 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COMMD9Q9P000 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD9Q9P000 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 HCG11-201ENST00000411553 5696 ntBASIC18.36■□□□□ 0.53
COMMD9Q9P000 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 AC005229.4-201ENST00000610085 2198 ntBASIC18.36■□□□□ 0.53
COMMD9Q9P000 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.36■□□□□ 0.53
COMMD9Q9P000 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD9Q9P000 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
COMMD9Q9P000 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COMMD9Q9P000 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD9Q9P000 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
COMMD9Q9P000 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD9Q9P000 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD9Q9P000 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COMMD9Q9P000 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD9Q9P000 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.34■□□□□ 0.53
COMMD9Q9P000 ABHD17AP5-201ENST00000580133 923 ntBASIC18.34■□□□□ 0.53
COMMD9Q9P000 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD9Q9P000 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.34■□□□□ 0.53
COMMD9Q9P000 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD9Q9P000 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD9Q9P000 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD9Q9P000 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD9Q9P000 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD9Q9P000 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.33■□□□□ 0.52
COMMD9Q9P000 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD9Q9P000 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD9Q9P000 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms