Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
UBQLN4Q9NRR5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 EP400NL-214ENST00000641289 2402 ntBASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN4Q9NRR5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 MIR939-201ENST00000401314 82 ntBASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN4Q9NRR5 OR7E47P-201ENST00000546390 1422 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 AC091305.1-201ENST00000479476 895 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 AF213884.3-201ENST00000563833 479 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 AL031432.3-201ENST00000607698 485 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 AL136967.2-201ENST00000623968 743 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 RASA4CP-201ENST00000424092 1398 ntBASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN4Q9NRR5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 IGHV3-19-201ENST00000521488 291 ntBASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN4Q9NRR5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 SUDS3P1-201ENST00000505831 966 ntBASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN4Q9NRR5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
UBQLN4Q9NRR5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms