Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
Q9N2K0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Q9N2K0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Q9N2K0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q9N2K0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Q9N2K0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.13■□□□□ 0.49
Q9N2K0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Q9N2K0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 MIR6724-1-201ENST00000616420 92 ntBASIC18.13■□□□□ 0.49
Q9N2K0 MIR6724-2-201ENST00000616483 92 ntBASIC18.13■□□□□ 0.49
Q9N2K0 MIR6724-4-201ENST00000617390 92 ntBASIC18.13■□□□□ 0.49
Q9N2K0 MIR6724-3-201ENST00000622482 92 ntBASIC18.13■□□□□ 0.49
Q9N2K0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 AC244015.2-201ENST00000616358 1861 ntBASIC18.13■□□□□ 0.49
Q9N2K0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q9N2K0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.13■□□□□ 0.49
Q9N2K0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Q9N2K0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.12■□□□□ 0.49
Q9N2K0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.12■□□□□ 0.49
Q9N2K0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.12■□□□□ 0.49
Q9N2K0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Q9N2K0 AC241377.3-202ENST00000626088 1088 ntBASIC18.12■□□□□ 0.49
Q9N2K0 AC241585.3-202ENST00000628937 1088 ntBASIC18.12■□□□□ 0.49
Q9N2K0 AC245100.8-202ENST00000629247 1058 ntBASIC18.12■□□□□ 0.49
Q9N2K0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.12■□□□□ 0.49
Q9N2K0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.12■□□□□ 0.49
Q9N2K0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Q9N2K0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Q9N2K0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.12■□□□□ 0.49
Q9N2K0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Q9N2K0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.11■□□□□ 0.49
Q9N2K0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
Q9N2K0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Q9N2K0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Q9N2K0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.11■□□□□ 0.49
Q9N2K0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Q9N2K0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Q9N2K0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.1■□□□□ 0.49
Q9N2K0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.1■□□□□ 0.49
Q9N2K0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.1■□□□□ 0.49
Q9N2K0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Q9N2K0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 UNC93B8-201ENST00000511903 705 ntBASIC18.1■□□□□ 0.49
Q9N2K0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.1■□□□□ 0.49
Q9N2K0 AL451085.2-201ENST00000605085 799 ntBASIC18.1■□□□□ 0.49
Q9N2K0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Q9N2K0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Q9N2K0 AL031602.1-201ENST00000633169 911 ntBASIC18.09■□□□□ 0.49
Q9N2K0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.09■□□□□ 0.49
Q9N2K0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Q9N2K0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.09■□□□□ 0.49
Q9N2K0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.09■□□□□ 0.49
Q9N2K0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.09■□□□□ 0.49
Q9N2K0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.09■□□□□ 0.49
Q9N2K0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Q9N2K0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Q9N2K0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.09■□□□□ 0.49
Q9N2K0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Q9N2K0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Q9N2K0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms