Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HES4Q9HCC6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HES4Q9HCC6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HES4Q9HCC6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HES4Q9HCC6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HES4Q9HCC6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
HES4Q9HCC6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 AC008406.3-201ENST00000620001 1374 ntBASIC18.32■□□□□ 0.52
HES4Q9HCC6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 UNC93B3-201ENST00000308076 687 ntBASIC18.32■□□□□ 0.52
HES4Q9HCC6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HES4Q9HCC6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.32■□□□□ 0.52
HES4Q9HCC6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
HES4Q9HCC6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.31■□□□□ 0.52
HES4Q9HCC6 AC079089.2-201ENST00000531211 1277 ntBASIC18.31■□□□□ 0.52
HES4Q9HCC6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.31■□□□□ 0.52
HES4Q9HCC6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.31■□□□□ 0.52
HES4Q9HCC6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HES4Q9HCC6 PKD1P6-201ENST00000343738 4769 ntBASIC18.31■□□□□ 0.52
HES4Q9HCC6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
HES4Q9HCC6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HES4Q9HCC6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 C11orf96-202ENST00000528572 1834 ntBASIC18.3■□□□□ 0.52
HES4Q9HCC6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 AC087239.1-201ENST00000622671 572 ntBASIC18.3■□□□□ 0.52
HES4Q9HCC6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HES4Q9HCC6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.3■□□□□ 0.52
HES4Q9HCC6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HES4Q9HCC6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HES4Q9HCC6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HES4Q9HCC6 AC010141.3-201ENST00000456659 717 ntBASIC18.29■□□□□ 0.52
HES4Q9HCC6 AP005435.1-201ENST00000529293 1178 ntBASIC18.29■□□□□ 0.52
HES4Q9HCC6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.29■□□□□ 0.52
HES4Q9HCC6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HES4Q9HCC6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.28■□□□□ 0.52
HES4Q9HCC6 MIR4767-201ENST00000582827 78 ntBASIC18.28■□□□□ 0.52
HES4Q9HCC6 AL136162.1-201ENST00000607711 1078 ntBASIC18.28■□□□□ 0.52
HES4Q9HCC6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HES4Q9HCC6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HES4Q9HCC6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HES4Q9HCC6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HES4Q9HCC6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HES4Q9HCC6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HES4Q9HCC6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HES4Q9HCC6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HES4Q9HCC6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms