Protein–RNA interactions for Protein: Q9H930

SP140L, Nuclear body protein SP140-like protein, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP140LQ9H930 Z92544.1-202ENST00000571933 1220 ntBASIC19.59■□□□□ 0.73
SP140LQ9H930 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.59■□□□□ 0.73
SP140LQ9H930 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.59■□□□□ 0.73
SP140LQ9H930 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SP140LQ9H930 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SP140LQ9H930 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SP140LQ9H930 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SP140LQ9H930 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SP140LQ9H930 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SP140LQ9H930 AC005703.6-201ENST00000623265 1329 ntBASIC19.58■□□□□ 0.73
SP140LQ9H930 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SP140LQ9H930 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SP140LQ9H930 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.58■□□□□ 0.72
SP140LQ9H930 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SP140LQ9H930 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.58■□□□□ 0.72
SP140LQ9H930 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SP140LQ9H930 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SP140LQ9H930 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.58■□□□□ 0.72
SP140LQ9H930 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.72
SP140LQ9H930 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SP140LQ9H930 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SP140LQ9H930 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.57■□□□□ 0.72
SP140LQ9H930 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.57■□□□□ 0.72
SP140LQ9H930 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.57■□□□□ 0.72
SP140LQ9H930 AC005229.4-201ENST00000610085 2198 ntBASIC19.57■□□□□ 0.72
SP140LQ9H930 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.57■□□□□ 0.72
SP140LQ9H930 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.57■□□□□ 0.72
SP140LQ9H930 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.57■□□□□ 0.72
SP140LQ9H930 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.57■□□□□ 0.72
SP140LQ9H930 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.57■□□□□ 0.72
SP140LQ9H930 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SP140LQ9H930 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SP140LQ9H930 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SP140LQ9H930 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SP140LQ9H930 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.56■□□□□ 0.72
SP140LQ9H930 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SP140LQ9H930 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.72
SP140LQ9H930 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SP140LQ9H930 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SP140LQ9H930 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.55■□□□□ 0.72
SP140LQ9H930 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.55■□□□□ 0.72
SP140LQ9H930 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.55■□□□□ 0.72
SP140LQ9H930 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.55■□□□□ 0.72
SP140LQ9H930 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.55■□□□□ 0.72
SP140LQ9H930 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SP140LQ9H930 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
SP140LQ9H930 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SP140LQ9H930 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.54■□□□□ 0.72
SP140LQ9H930 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.54■□□□□ 0.72
SP140LQ9H930 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SP140LQ9H930 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.54■□□□□ 0.72
SP140LQ9H930 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
SP140LQ9H930 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SP140LQ9H930 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SP140LQ9H930 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.53■□□□□ 0.72
SP140LQ9H930 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SP140LQ9H930 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.53■□□□□ 0.72
SP140LQ9H930 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SP140LQ9H930 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SP140LQ9H930 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms